Pairwise Alignments

Query, 338 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 590 a.a., branched-chain amino acid ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

 Score =  152 bits (385), Expect = 2e-41
 Identities = 90/271 (33%), Positives = 146/271 (53%), Gaps = 9/271 (3%)

Query: 44  LYALLALSLNIVIGYLGELTFGHAAFVGVGAYTSAILSTQLGLPPLLGLPLAGLVAAAFG 103
           L AL+A+ L ++ G  G  +FG AAF G GAYT+A ++T  G+ P L LP + +VA    
Sbjct: 36  LAALVAMGLVLLTGVGGLTSFGQAAFCGFGAYTTAYITTVYGISPWLALPASLVVAGIAA 95

Query: 104 LVIGYAALRVVGPQFAILTLGFGAILFTITNHWVDLTRGPMGITDIPPMAIGPLAFDSAR 163
           +++G   +R+ G    + T+ +G  L+ + +    L R   GI+ +PP++IGP+      
Sbjct: 96  VLLGLMTVRLSGHYLPLGTIAWGIALYYLFSKLDFLGRND-GISRVPPLSIGPIDMYDPH 154

Query: 164 PTYYLVLALVLATAYLCHALVGSRTGRAFLAVRENAPLAASLGINVFHTKLMGFVAATAI 223
             Y+++ A+VL +A L   L+ SRTGRA  A+R     A + G+     KL+ F+ A  +
Sbjct: 155 TIYFVIWAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVL 214

Query: 224 AGIGGAIYAHYIRVITPDIMGVHNVAALIIVVIIGGRGTILGPILGALVYIGLLESLR-- 281
           AG+ G +YAH+ R + P   G       + + ++GG G + G +LGA + I L E L+  
Sbjct: 215 AGLSGWLYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGY 274

Query: 282 ------VAGPLRMVIFAALLTGTVVFLPGGL 306
                   G L +++F  LL   +   PGG+
Sbjct: 275 LPLLFGGQGQLEIIVFGILLVVLLQLAPGGV 305