Pairwise Alignments

Query, 338 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 418 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Pseudomonas sp. BP01

 Score =  167 bits (424), Expect = 3e-46
 Identities = 109/329 (33%), Positives = 164/329 (49%), Gaps = 23/329 (6%)

Query: 12  QPLAIAGGIAALAVLPFLAGNAYLEHLLVLWMLYALLALSLNIVIGYLGELTFGHAAFVG 71
           Q   I G I A  V PF      ++ +  L ++Y LL L LNIV+G  G L  G+  F  
Sbjct: 91  QRYVIIGLIVAALVWPFFGSRGAVD-IATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYA 149

Query: 72  VGAYTSAILSTQLGLPPLLGLPLAGLVAAAFGLVIGYAALRVVGPQFAILTLGFGAILFT 131
           VGAY+ A+LS  LG    + LP+AGL+AA FG ++G+  LR+ G   AI+TLGFG I+  
Sbjct: 150 VGAYSYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRL 209

Query: 132 ITNHWVDLTRGPMGITDIPPMAIGPLAFDSARP----------------------TYYLV 169
              +  D T GP GI++IP      L F+                           Y + 
Sbjct: 210 FLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLEYNSINKVIFLYLVA 269

Query: 170 LALVLATAYLCHALVGSRTGRAFLAVRENAPLAASLGINVFHTKLMGFVAATAIAGIGGA 229
           L L L   ++ + L+    GRA+ A+RE+     +LG+N    KL  F      AG  G+
Sbjct: 270 LLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGS 329

Query: 230 IYAHYIRVITPDIMGVHNVAALIIVVIIGGRGTILGPILGALVYIGLLESLRVAGPLRMV 289
            +A    ++TP+       A ++ +V++GG G+ LG IL A+V I L E +R     RM+
Sbjct: 330 FFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEYRML 389

Query: 290 IFAALLTGTVVFLPGGLISLWQRWRNAHK 318
           +F AL+   +++ P GL+ + +     H+
Sbjct: 390 MFGALMVLMMIWRPQGLLPMQRPHMELHR 418