Pairwise Alignments

Query, 280 a.a., Formamidopyrimidine-DNA glycosylase from Azospirillum sp. SherDot2

Subject, 271 a.a., DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) from Sphingomonas koreensis DSMZ 15582

 Score =  271 bits (692), Expect = 1e-77
 Identities = 152/280 (54%), Positives = 177/280 (63%), Gaps = 10/280 (3%)

Query: 1   MPELPEVETVCRGLAPHLEGRRLVRVEQRRPNLRTPFPPRFCERLTGRVVTSVRRRAKYI 60
           MPELPEVET  RGLAP LEGRR+ RV  RRP+LR P P    +RLTG  VT++ RRAKY 
Sbjct: 1   MPELPEVETTVRGLAPALEGRRIRRVLMRRPDLRRPMPQDLGQRLTGASVTALGRRAKYG 60

Query: 61  LMHLDDGGVLIAHLGMSGRMIIAPERPDVFDKHDHVVFETDAGTIVTFNDARRFGLMDLT 120
           L+  D G  +I HLGMSGR  + P        HDH++ ETD G  +  ND RRFG +DL 
Sbjct: 61  LIDTDRGDTMIFHLGMSGRWRVDPSETLT---HDHLILETDEGRSLALNDPRRFGSIDLV 117

Query: 121 VADALGDHPMLRNLGPEPLGNEFSGPDLARRLAGKITPIKAALLDQSIVAGLGNIYVSEA 180
             DAL   P    +GPEPLG +F+   LA    G+  P+KA LLDQ IVAGLGNIYV EA
Sbjct: 118 PTDALDAWPAFAAMGPEPLGPDFTAAHLAAAFDGRAAPVKALLLDQRIVAGLGNIYVCEA 177

Query: 181 LYRSGILPTRTAASLTAGEVDRLAVAVREVLERAIAAGGSSLRDYRQASGELGYFQHQFA 240
           L+ SGI PTR A  +    + +L  A+R VL  AI AGGSSLRDY +  GELGYF  Q+ 
Sbjct: 178 LHMSGIAPTRAAGRIATPRLAQLVDAIRAVLASAIEAGGSSLRDYARPDGELGYFSKQWR 237

Query: 241 VYDREGEGCPDCDCDRARTGGVQRIVQSGRSTFFCAARQR 280
           VY REGE C  C         VQR V SGRSTFFCA  Q+
Sbjct: 238 VYGREGEPCL-CGAP------VQRRVDSGRSTFFCAKCQK 270