Pairwise Alignments

Query, 350 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 712 a.a., poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB from Ralstonia solanacearum PSI07

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 66/278 (23%), Positives = 107/278 (38%), Gaps = 56/278 (20%)

Query: 20  AFVPVSRPAAA-------EAASPQGASAVVFAYDRFGEDQNPSISIRIDQFEAHLDELTD 72
           A +  +RPAAA       +  S  G +  V  +    ++   S     D F      LT+
Sbjct: 7   ALLAFARPAAALPVDFLPKPDSADGKTFRVLCFHDIRDNLRASFETLPDPFAIDTKMLTN 66

Query: 73  -------GDYTVLPLPKILDALRTGKPLPDRTVAITIDEASRSAFTEAWPRLKAANLPFT 125
                    Y  + L +I +A R GKPLP R + +T D+   S +T+ +P LK    P  
Sbjct: 67  MFSWLQANGYHPVTLAQIGEARRGGKPLPSRPILLTFDDGYESHYTKVFPLLKQFRFPAV 126

Query: 126 LFVATDAVD--RGSPA------------HMTWGEIRQLAAAGVT----------IGALG- 160
             + T+  D  RG+               M W +IR++ A+G+            G LG 
Sbjct: 127 FALVTEWTDAPRGAKVKLSDKQIVERDFFMNWDQIREMQASGLVEFATHTHDMHHGTLGN 186

Query: 161 --------TSTQSMLAR-----SPDQ----LAADLRRMSDRFQAELGRRPAVLAYPQGEY 203
                    ST + L +     + D+    + ADL+R  D  Q   G +   + +P G +
Sbjct: 187 PQGNEMPTASTHAYLPKLGRYETDDEYRKRVRADLQRSIDIIQKNTGAKVQSVVWPYGAH 246

Query: 204 SLAVRQMVIDQGFTAAFGQQSGVLHPQADPWSLPRFVM 241
           +L + Q   + G       + G   P      + R +M
Sbjct: 247 NLMLDQEAANVGLKYMLTLEPGPNTPDVPLTDIRRSLM 284