Pairwise Alignments

Query, 234 a.a., Octopine transport system permease protein OccQ from Azospirillum sp. SherDot2

Subject, 236 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  258 bits (660), Expect = 5e-74
 Identities = 131/232 (56%), Positives = 172/232 (74%), Gaps = 1/232 (0%)

Query: 2   LELLSFGPNGWGGQLLMGTAMTVAVAVSAFAFGILVGSLGASAKLSHSLALNVVADVYTT 61
           L LL +G  GWG +L  G  MTV VA  ++ FGI+ GSL A+AKLS   +L ++ DVYTT
Sbjct: 3   LTLLQWGDAGWGDELARGAMMTVVVAACSYFFGIIFGSLFAAAKLSRFWSLRLLGDVYTT 62

Query: 62  IVRGIPELLVIYLLFFGGSGVATSIASA-FGYDGRVDLNAFTIGVLAVGLISGAYSTEVI 120
           +VRG+PELL+I+L+FFGG  +  +IA+  FGY+G ++   F IGVL + + +GAY+TEVI
Sbjct: 63  VVRGVPELLIIFLVFFGGGTLLRTIANGLFGYEGYIEPPIFVIGVLCISVSAGAYATEVI 122

Query: 121 RGAVQSVPFGQIEAARACGMSRWLILRRVLVPQTLRFALPGLGNVWQLTLKDTALVSVTA 180
           R AV +VP GQIEAA++ GM  WL LRRVL+PQ  RFALPGLGNVWQ TLKDT+L+SV  
Sbjct: 123 RAAVLAVPPGQIEAAKSIGMGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISVVG 182

Query: 181 LAELMRITHLAAGATRQPFLFYSTAAVLYLMLTTISTALFNRAEISANRGVR 232
           L E+MR   + AG+T+QPF FY TA V++L+L+++S   F +AE  ANRGVR
Sbjct: 183 LVEIMRTAAMGAGSTKQPFTFYITAFVIFLLLSSVSNRGFLKAEKWANRGVR 234