Pairwise Alignments

Query, 380 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Azospirillum sp. SherDot2

Subject, 455 a.a., serine endoprotease DegQ from Escherichia coli ECOR38

 Score =  308 bits (788), Expect = 3e-88
 Identities = 162/321 (50%), Positives = 226/321 (70%), Gaps = 8/321 (2%)

Query: 59  TIAPMLEQVTPAVVNISVLSQAPQAENPLLRDPFFRRFF--NLPDQMPQSKPQVSAGSGV 116
           ++APMLE+V PAVV++ V   A Q +        F++FF  +LPDQ  Q  P    GSGV
Sbjct: 41  SLAPMLEKVLPAVVSVRVEGTASQGQKI---PEEFKKFFGDDLPDQPAQ--PFEGLGSGV 95

Query: 117 IIDARNGYVVTNNHVVENAQEIAVTLKDRRRLRAKLIGRDAATDIALLQIKADG-LAALS 175
           II+A  GYV+TNNHV+  AQ+I++ L D R   AKLIG D  +DIALLQI+    L  ++
Sbjct: 96  IINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIA 155

Query: 176 IGDSDRTKVGDFVVAIGNPFGLGQTVTSGIVSAMGRSGLKIEGYEDFIQTDASINPGNSG 235
           I DSD+ +VGDF VA+GNPFGLGQT TSGIVSA+GRSGL +EG E+FIQTDASIN GNSG
Sbjct: 156 IADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSG 215

Query: 236 GALVNFQGELIGINTAIIGPAGGSVGIGFAVPVSIVRSVVEQLREYGEVRRGRLGVAIQD 295
           GAL+N  GELIGINTAI+ P GGSVGIGFA+P ++ R++ +QL ++GE++RG LG+   +
Sbjct: 216 GALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 275

Query: 296 LTPDLAESMSLKGDEGALIAKIERGSPADSGGLRSGDVVIAVDGRPVRSATDFRNRIGLL 355
           ++ D+A++ +L    GA ++++  GS +   G+++GD++  ++G+P+ S  + R+RI   
Sbjct: 276 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGIKAGDIITRLNGKPLNSFAELRSRIATT 335

Query: 356 RVGTPVQLTVMREGGQKSVTV 376
             GT V+L ++R G    V V
Sbjct: 336 EPGTKVKLGLLRNGKPLEVEV 356



 Score = 33.9 bits (76), Expect = 9e-06
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 300 LAESMSLKGDEGALIAKIERGSPADSGGLRSGDVVIAVDGRPVRSATDFR 349
           L++     G +G  I ++ +GSPA   GL+  DV+I V+   V S  + R
Sbjct: 380 LSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMR 429