Pairwise Alignments

Query, 685 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 542 a.a., DNA-binding protein from Pectobacterium carotovorum WPP14

 Score =  156 bits (394), Expect = 3e-42
 Identities = 133/492 (27%), Positives = 216/492 (43%), Gaps = 72/492 (14%)

Query: 80  LPEPFNEFAKALVRYLQGMNPVTAPGERLAALRFLEAALREQNTSFPW-KATAATFNRAA 138
           L + F +FAKA + ++   N   +    L+ L+ +E  L + +            FN  A
Sbjct: 65  LDDCFIDFAKAYMLHVHSFNKAKSKIITLSMLKIVEFVLLKSHMKADIIHCDNFVFNECA 124

Query: 139 QLAREQGSPAQAYKIGLKLEELASFMDQNKLVSGS-LAWANPIPDPGKTMNKVGEEFDRN 197
           +LA E+ S ++A  +G +LE+L+ F+++N++ + S L W NP+     T    G +    
Sbjct: 125 RLATEKYSKSRAVGVGKELEKLSIFLNENRMTNSSYLFWVNPLRYK-TTQTWSGYDLSLE 183

Query: 198 RKEKLPTEAALDALPKIFRLATDQ---PDLIISSLVAILMMTPDRVGELLHLPALC--VH 252
             EKLP   ++ A+ +IF     Q    D+  +S++ +LM  P R+ E+L LPA C    
Sbjct: 184 GHEKLPDIKSVIAIAEIFSKDDKQLSLRDIFTASVLTLLMCAPGRISEILSLPADCEITE 243

Query: 253 RGLKG--ELGLRWLPEKGGAPMIKWVIPLLADIAEQAVDRLLTATAEGRRIAKWYEDNPD 310
           +  KG    GLR+   KG    IKW+   +  +A++A+ RLL  + + R +A+ +E N  
Sbjct: 244 KDSKGIQRYGLRFFSAKGYEGDIKWIPTAMIPVAKKAISRLLHLSHQARSLARQFEGN-- 301

Query: 311 RLYLPPCLDDLRGKEYLDSEDIRRILGMSDRRPALLWAKKRGLRIERPSYHESLIRFSDV 370
                                             L+   K  +  + P Y        D 
Sbjct: 302 ------------------------------HSDVLVNRLKENIPEDFPWY--------DA 323

Query: 371 EKEVLKGLPPGFPVLNRRTGMRFSQALCVVNAGTFSSNEAPS-SCMFEAIVDHHIHQALG 429
           EK +                 ++S ALC++N G    N+A     +F       I   + 
Sbjct: 324 EKNI-----------------KYSNALCLLNEGQLCKNKAVRLDKLFRPNNSFFISDIID 366

Query: 430 GLGERGN-SIFAKHGFREPDGSPIRVRSHAFRHHLNTLAQRGGLSQIDIAKWSGRKSEHQ 488
               +G  +IF +HG+   D SP  +R+H  RH LNT AQ  G+ +  IA+WSGRK   Q
Sbjct: 367 SEYIKGEFNIFKRHGYLNKDESPYLLRTHQLRHLLNTFAQINGMDEFSIARWSGRKFISQ 426

Query: 489 NAAYDHVSSEETMEMARERLGPVGKVPGAIAKIPKGTLITRTELAKLGIKAGHTTDFGYC 548
           N +YDH +  +  ++ RE           I +IP   ++   E   L   A   T +G C
Sbjct: 427 NVSYDHRTHLQMSKLIREEKSSEVINNHRIKQIP---VVDLNEFDSLNSGAILITQYGGC 483

Query: 549 VHDFAMMPCQRF 560
            H +A  PC+ +
Sbjct: 484 KHAYAFEPCRYY 495