Pairwise Alignments

Query, 517 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 508 a.a., ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Shewanella oneidensis MR-1

 Score =  519 bits (1336), Expect = e-151
 Identities = 256/493 (51%), Positives = 348/493 (70%), Gaps = 8/493 (1%)

Query: 12  LYDGVEWDYDKIKRVYDAIEHIALKEMGLDVYPNQIEVITAEQMLDAYSSIGMPLMYKHW 71
           L DG +W ++ ++     IE +A     L+ YPNQIE+ITAEQM+DAY+ IGMP+ Y HW
Sbjct: 12  LSDGPDWSFELLQSYLKEIERVAAIYK-LNAYPNQIEIITAEQMMDAYAGIGMPIGYTHW 70

Query: 72  SFGKHFARDEMMYRKGYRGLAYEIVINSSPCISYIMEENTMTMQTLVIAHAAFGHNHFFK 131
           SFGK F   E  Y++G  GLAYEIVINS+PCI+Y+MEENT+TMQ LV+AHA FGHN FFK
Sbjct: 71  SFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSFFK 130

Query: 132 NNQLFQQWTDAQGILDYLEFAKTYIAHCEERYGHAAVERVLDAAHALMSQGVHKYPKKRS 191
           NN LF+ WTDA  I+DYL FAK YI+ CE++YG   VE V+D+ HALM+ GV +Y +   
Sbjct: 131 NNYLFKTWTDASSIIDYLVFAKNYISDCEQKYGIEQVESVIDSCHALMNYGVDRYKRPAE 190

Query: 192 -DLRTEQRRERERQEYQDQTFNDLWRTVPKTTAGPRPAKSVSERKKLLGLPEENILYFLE 250
              R EQ R+++R+ Y     NDLWRT+P T    +P+   + +++    P+ENILYF+E
Sbjct: 191 ISFREEQARQKDREAYLQSQVNDLWRTIP-THQQQQPS---TTKRRFPAEPQENILYFIE 246

Query: 251 KKAPRLEHWQRELLRIVRHISQYFYPQKQTKVMNEGCATYVHYQIMSRLHETGQISEGAF 310
           K AP LE WQRE++RIVR ++QYFYPQKQT+VMNEG AT+ HY I++ L++ G +S+   
Sbjct: 247 KNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVSDRFM 306

Query: 311 LEFLHSHTSVVFQPEFDDKRFSGLNPYALGFAMMQDIARIAEKPTDEDRQWFPELAGRGD 370
           +EFL SHT VV QPE++ + +SG+NPYALGFAM  DI RI E PTDEDR WFP++AG  +
Sbjct: 307 MEFLQSHTGVVAQPEYNSRYYSGINPYALGFAMFTDIRRICEAPTDEDRIWFPDIAG-SN 365

Query: 371 GMAAVREAWANFRDESFVLQYLSPHLMRKLKLFSVRDDAEDPYLLVDHIHNERGYRDIRK 430
            +  +  A  NF+DESF+ QYLSP ++R+ KLF + DD +  YL V  IH+E+GY+DIR 
Sbjct: 366 WLDTLHFAMQNFKDESFISQYLSPRVIRQFKLFGIHDDEKRNYLSVSAIHDEQGYQDIRN 425

Query: 431 KLARQYDLGYLEPDIQIVDVDLAGDRKLILQHRVTNGVLLDESDAKAVLRHIANLWGYEV 490
            L++QY+L  +EP+IQ+ +V++ GDR L L++ V N  +        VL+H+  LWG+ V
Sbjct: 426 LLSQQYNLSNIEPNIQVHNVEINGDRSLTLRY-VPNKDIPLAGSYNEVLKHLHRLWGFSV 484

Query: 491 QLIEVSAISEAIL 503
            L +V+A +   L
Sbjct: 485 SLEQVNADNSVTL 497