Pairwise Alignments

Query, 345 a.a., C4-dicarboxylate-binding periplasmic protein DctP from Azospirillum sp. SherDot2

Subject, 327 a.a., TRAP transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  152 bits (383), Expect = 2e-41
 Identities = 104/340 (30%), Positives = 178/340 (52%), Gaps = 16/340 (4%)

Query: 1   MKSLKALLAGIALAALTVPALVAGAANAADYKAEYKLSTVLGKPFPWGVGGDRWAELVKE 60
           +K  +ALL    L A       AG A AAD     K + V+ +  P G G   + +L +E
Sbjct: 2   LKLSRALLCAATLFA-------AGLAQAAD-PIVIKFAHVVAENTPKGQGALLFKKLAEE 53

Query: 61  KTGGRINIKMYPGTSLVNGDQTKEFTALRQGTIDMAVGSTINWSPQVKELNLFSLPFLMP 120
           +  GR+ +++YP +SL  GD  KE  AL  G + M   S   +    K++ ++ LPFL  
Sbjct: 54  RLPGRVKVEVYPNSSLF-GDG-KEMEALLLGDVQMLAPSLAKFEQYTKQVQIYDLPFLFN 111

Query: 121 DHKALDALTQGEVGKKLFELLASKDVMPLAWGENGFREISNSKHPIRTPADLKGLKIRVV 180
           D  A+D   Q   GK+L   +  K+++ LA+  NG +++S +K  +  P D +GLK RV 
Sbjct: 112 DLAAVDRF-QAAQGKELLTSMQDKNILGLAYWHNGLKQLSANK-ALHEPKDARGLKFRVQ 169

Query: 181 GSPLYLDTFTALGANPTQMSWADAQPALSTGAVDGQENPLAIFVAAKLATLGQKNLTLWG 240
            S +  + F A+ ANP +MS+A+    L TG V+G EN  + + + K+  + QK  T   
Sbjct: 170 ASSVLEEQFKAIRANPRKMSFAEVYQGLQTGTVNGTENTWSNYESQKVNEV-QKYFTESN 228

Query: 241 YVADPLIFVVNKEVWASWSKEDQEAVRAAAVQAAAEEVAISRKGITADDDSLLKEITAQG 300
           +     + + N + W     + +  ++   V+   E   ++++    +  +  K I A+ 
Sbjct: 229 HGLIDYMVITNAKFWTGLPPDIRSTLQQIMVEVTVE---VNKQAEALNQSAKQKIIDAKT 285

Query: 301 VEVVRLTPDQQKAFQTATQPVFDKWAKQIGPDLVKAAQAA 340
            E++ LTP+Q++ ++ A +PV+ K+  +IG DL+KAA A+
Sbjct: 286 SEIIELTPEQRQLWREAMRPVWQKFEGEIGADLIKAADAS 325