Pairwise Alignments

Query, 345 a.a., C4-dicarboxylate-binding periplasmic protein DctP from Azospirillum sp. SherDot2

Subject, 342 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  179 bits (453), Expect = 1e-49
 Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 5   KALLAGIALAALTVPALVAGAANAADYKAEYKLSTVLGKPFPWGVGGDRWAELVKEKTGG 64
           K L  G+  AA        G A A       ++S    K  P G+   + +E +  K+GG
Sbjct: 7   KTLRPGLIAAAAAAAVFTTGLAQAEFQDRTVRISMTGSKDHPAGIALTKTSECLAAKSGG 66

Query: 65  RINIKMYPGTSLVNGDQTKEFTALRQGTIDMAVGSTINWSPQVKELNLFSLPFLMPDHKA 124
           +   KM P    V G +    T +R G++D AV +T   +P V +L +F LPFL+ D+K 
Sbjct: 67  KF--KMRPFFEAVLGPEQANLTQVRSGSLDGAVITTAATAPAVPQLGVFDLPFLVSDYKE 124

Query: 125 LDALTQGEVGKKLFELLASKDVMPLAWGENGFREISNSKHPIRTPADLKGLKIRVVGSPL 184
           +DAL  G  G++L     +  ++ L++ E+GFR ++NS+ PI    DL+GLK+RV+ +  
Sbjct: 125 IDALLDGAFGERLAGFYGAAGLVHLSFWEHGFRNVTNSRRPINKLEDLQGLKLRVIQNKT 184

Query: 185 YLDTFTALGANPTQMSWADAQPALSTGAVDGQENPLAIFVAAKLATLGQKNLTLWGYVAD 244
           ++DTFT LGANP  M + +   AL T A+DGQENP+A    +KL  + QK++ L  +V  
Sbjct: 185 FIDTFTQLGANPVPMPFTEVYSALETKAIDGQENPVAFLQTSKLYEV-QKHVALTRHVYS 243

Query: 245 PLIFVVNKEVWASWSKEDQEAVRAAAVQAAAEEVAISRKGITADDDSLLKEITAQGVEVV 304
           P+ F+ +K  +   + ++Q+A++      A E   ++R+     +D     +  QGV + 
Sbjct: 244 PVNFIYSKTQYDKLAPDEQKALK----DCAMENRLVNRQLGRDMEDKSAAYLKTQGVAIT 299

Query: 305 RLTPDQQKAFQTATQPVFDKWAKQIGPDLVKAAQAAI 341
             +  + +  +  T+ V+      +GPDL+ A  A +
Sbjct: 300 EPSKAELERMREKTKVVYANQTAVLGPDLINALNAEV 336