Pairwise Alignments

Query, 408 a.a., Ammonia channel from Azospirillum sp. SherDot2

Subject, 416 a.a., Rh family protein/ammonium transporter (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (485), Expect = 3e-53
 Identities = 142/413 (34%), Positives = 207/413 (50%), Gaps = 42/413 (10%)

Query: 9   DVLFVLMGAVMVLAMHCGFALLEVGTVRRKNQVNALVKILSDFAMSTIAYFFVGYAVAYG 68
           D  + L+   +V+ M  GFA+LE G VR KN    L K +  ++++ I Y  VGY + Y 
Sbjct: 19  DTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVCLYSIACIMYLVVGYNIMY- 77

Query: 69  ID-----FFADAHTLVG-KGSGGFAAYGYDLVKFFFLATFAAAVPAIVSGGIAERARFWP 122
           +D     +     +L+G + S    A   D   FFF   F A   +IVSG +AER + W 
Sbjct: 78  VDNAEGGWLPSFASLIGAQASDADHALESD---FFFQVVFVATAMSIVSGAVAERMKLWA 134

Query: 123 QAGATLALIALFYPLLEGTVWGTRFGLQGWMAATFGQPFHDFAGSVVVHAFGGWVALGAV 182
               ++ +  + YP+     WG  F  +          F DFAGS +VH  G   A+  V
Sbjct: 135 FLIFSVVMTGVIYPVEGYWTWGGGFLSEAG--------FVDFAGSGIVHMAGAAAAISGV 186

Query: 183 LNLGNRRGRYRPNGSLIAIPPSNIPFLALGAWVLCVGWFGFNVMSAQVLD-----GVTGL 237
           L LG R+G+Y PNG +  IP SN+P   LG ++L +GWFGFN  S  ++           
Sbjct: 187 LLLGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLLVSDAENASAVAK 246

Query: 238 VALNSLMAMVGGIVTSLVI-----SRTDPGFVHNGALAGLVAVCAGSDVMHPLGAL--VT 290
           + +N+  A   G V++LV+      + D   + NGALAGLVA+ A  D + P   L  V 
Sbjct: 247 IFVNTNSAAAFGAVSALVVCKMVWGKADLTMILNGALAGLVAITA--DPLSPSLPLAGVI 304

Query: 291 GGIAGLLFVWAFNKCQID-WKIDDVLGVWPLHGLCGLTGGLLAGVFGQEALGGLGGVSIL 349
           G +AG L V  F+    D  KIDD +G   +HG+ GL G +L  +   +A       ++L
Sbjct: 305 GMVAGGLVV--FSIVMFDRVKIDDPVGAISVHGVAGLFGVMLVPLSNADA-------TVL 355

Query: 350 SQIVGTLGGAGFGFASGLAVYGLLRVTVGIRLDPEQEYKGADLSLHHITAYPE 402
            Q+ G      + F    A + +L++T+GIR+  E+EY G D S   I AYPE
Sbjct: 356 GQLYGASVIFAWVFGVSFAAWYILKITMGIRVSEEEEYNGMDASDCGIDAYPE 408