Pairwise Alignments

Query, 573 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 561 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  285 bits (730), Expect = 3e-81
 Identities = 178/418 (42%), Positives = 267/418 (63%), Gaps = 25/418 (5%)

Query: 162 AITDSLEALVSKTDTAAAAEIAKLNRSIDTVRADVDSLKLVVIAGGLIGLVACLGTAIMM 221
           AI++ L+  +S    AA+A++A       T++     L ++V+ GG + ++A L  AI+ 
Sbjct: 163 AISNKLDKELSDRSHAASADVAS------TIK-----LTILVVGGGFLAVLA-LAFAIVQ 210

Query: 222 TRGVTRPLSAMTDAMHRLAEGDSTVIVPAEGRSDEIGAMASALVVFKGNAIEKRRLEEEQ 281
             G+ RP+  +   +  +A G    +   E R DEIG  A+A+     N I+    E+ +
Sbjct: 211 F-GIARPIGRLVGDLQAMARGHDVEVSGTE-RGDEIGQTANAV-----NDIKLMLAEKAR 263

Query: 282 RNADLRAEEERI------QAMRQLADRLEQRIGGILRTVAGEARVLQQAAKMMTDTADQT 335
           + A  +AE++RI      Q M +LA   E  +G ++R V+  +  L+ +A  +T +A + 
Sbjct: 264 QEAAGKAEQDRIIAVQRKQEMEKLAHHFEAAVGEVIRAVSSASTELEASATTLTSSAQRA 323

Query: 336 NLRSEAVAAATQQTSASVETVAAAAEELSASVGEIGRQVSQSTGIAEEAVERARHANTKV 395
              + +VAAA++Q SA+V++VA+A EE+++SV EI RQV  S  IA EAV +A+  N +V
Sbjct: 324 QEVTTSVAAASEQASANVQSVASATEEMASSVTEISRQVQDSARIAHEAVTQAQRTNERV 383

Query: 396 DGLAAAARQVGDVVQLINSIASQTNLLALNATIEAARAGEAGKGFAVVASEVKNLANQTA 455
             L+ AA ++GDVV+LIN+IA QTNLLALNATIEAARAGEAG+GFAVVA+EVK LA QTA
Sbjct: 384 GELSQAATRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTA 443

Query: 456 KATEEISAQITAIQAATGEAVSDIQGITRVIESMNDIATGIAGAVSQQAAATGEIARNAQ 515
           KAT EIS  I  IQAAT E+V+ I+ I   I  M++IA+ IA AV +Q AAT EI+RN Q
Sbjct: 444 KATGEISQHIGGIQAATHESVNAIREIGSTISKMSEIASTIASAVEEQGAATQEISRNVQ 503

Query: 516 QASTGTRDVNHNITGVSAAAGETGTAAKNVLNASTTLSQEAVAMERQLAEFLAQLRAA 573
           QA+ GT+ V+ ++  V   A ETG+A+  VL+A+ +L+ ++  +  ++ +FL  +RAA
Sbjct: 504 QAAMGTQQVSASVVDVQRGANETGSASTQVLSAAQSLANDSNRLRMEVGKFLETVRAA 561