Pairwise Alignments

Query, 498 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Azospirillum sp. SherDot2

Subject, 458 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase from Pseudomonas aeruginosa PA14

 Score =  216 bits (551), Expect = 1e-60
 Identities = 164/457 (35%), Positives = 217/457 (47%), Gaps = 24/457 (5%)

Query: 15  VATGGRLSGPSAWTATGVAIDSRKVAAGDLFVAIRGPNFDGHAFIGAALAAGAAAAMVDH 74
           VA   RL G  A   + V+ DSR +  G LF+A+ GP FDGH ++    A GA AA+V+ 
Sbjct: 12  VALDARLIGEDA-VFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLSEVAAKGAVAALVER 70

Query: 75  LPDGIPEGAPLLIAPSDTLESMAALGVVARARCGARFVGVTGSVGKTGTKETLRHVLSAQ 134
                P   P L+   DT  ++  LG + R +       +TGS GKT  KE L  +L  Q
Sbjct: 71  EVADAP--LPQLLV-RDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQ 127

Query: 135 G----ATYANEGSLNNHWGVPLSLARLPADSRYGVFELGMNHAGELGPLSRQVRPHVAIV 190
                +  A  G+LNN  GVPL+L +L    R  V ELG +  GE+       RPHVAI+
Sbjct: 128 AGDAESVLATRGNLNNDLGVPLTLLQLAPQHRSAVIELGASRIGEIAYTVELTRPHVAII 187

Query: 191 TTIEAVHLEFFSGVEAIADAKAEIFEGMDAGGIAVLNRDNGQYARLAAAARRQGLTDIWS 250
           T     H+  F G E I +AK EI EG+ A G AVLN D+  +    A A  + L    +
Sbjct: 188 TNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGRPLL---T 244

Query: 251 FGA-HEEADARLVDCSLHAT-CSAVTAMIRGERVQYCLSQPGRHWVMNSLAVLLAVKALG 308
           F     +AD R  D    A  C            Q  L+  GRH V N+LA   A  ALG
Sbjct: 245 FSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALG 304

Query: 309 ADVASAARSLSSLPPVKGRGTRKRIQLPQGAFTLIDESYNASPAAMAATLEVLGKIDPGA 368
             +      L +L PVKGR      QL      +ID+SYNA+PA+M A +++L     G 
Sbjct: 305 VPLDGIVAGLQALQPVKGRAV---AQLTASGLRVIDDSYNANPASMLAAIDILS----GF 357

Query: 369 GGRRIAVLGDMRELGERADALHIGLAEPLRAANVDAVYACGPHMKTLFDRLPAAMRGAWT 428
            GR + VLGDM ELG  A+  H  +     A  V A+YA GP M        A  R    
Sbjct: 358 SGRTVLVLGDMGELGSWAEQAHREVG-AYAAGKVSALYAVGPLMAHAVQAFGATGRHFAD 416

Query: 429 ETSVELAPIVTGTVKGGDVIMVKGSLGSRTGLIVDAL 465
           + S+  A     T +    I++KGS  +    +V AL
Sbjct: 417 QASLIGA---LATEQPTTTILIKGSRSAAMDKVVAAL 450