Pairwise Alignments

Query, 639 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 677 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2

 Score =  252 bits (643), Expect = 4e-71
 Identities = 219/672 (32%), Positives = 287/672 (42%), Gaps = 71/672 (10%)

Query: 11  AFDLHQERRFDEADAIYRQILDAVPDHVMTLHLRGILLGQSGRLEEGCGLIRQAIAGDGT 70
           A  LHQ  R  EADA+YRQ L A P     LHL G++  Q+GR  +   LI QA+A    
Sbjct: 32  AVPLHQSGRLAEADALYRQALAAQPRQPDALHLLGMIACQTGRFTDAADLIGQAVAARRD 91

Query: 71  QPDFHTNLAGLLEALGRSGEALDPMVRAATLDPTRTVQLNDFAMRSLKAGRPGEAAQALR 130
            PD+H NLA  L+ALGRS EA      A  L        N         G+  EAA A R
Sbjct: 92  VPDYHANLAYALQALGRSAEAERAARNALRLRRPFPEAANTLGNALNAQGKAEEAADAYR 151

Query: 131 AAVGVQPLSIELRCNLAVALAADRQGAAAAAERRIALLLAPDAAEMLRLLGEYLLQVGRQ 190
           AA+  +P   E   NL   L +  + A A    R A+   P   E    LG  LL +GR 
Sbjct: 152 AALRARPDYAEAEGNLGTVLRSLGRSAEAEPLLRHAVAANPSLLEAHAALGLALLDLGRS 211

Query: 191 APDGEAARTL-----------------------------RRALILDPLHHGIWNGLGRLH 221
                A R +                             RR L+L+P     WN  G   
Sbjct: 212 EEGETALRAVLARRPDHAPAALALAGSLQRRGADALPAHRRHLMLEPADAEGWNAHGLAL 271

Query: 222 KEAGRFTEARRAYESGLAVDPAAAELWNNRSNVLKGLDELDAALTGQRRAAALRPDEIGI 281
           + A R   A  A+   L + P  AE   N   V +    +  +   QRRA  LRP     
Sbjct: 272 QVADRIAPAGDAFTRALRLAPTMAEAMTNLGTVRRLQGRIVESADLQRRALDLRPGYAAA 331

Query: 282 RSNLGDALLLAGHPEEALANTQAVLALAPDLGE--SQLLRALALLTLGHFEEGWAAWEDR 339
            +NL  AL L    +EA A  +  LAL  D  +  ++  R+L  L  G   EGW  +  R
Sbjct: 332 HTNL--ALALQDLGDEAAAEREFTLALDADPAQALARFNRSLLQLRQGRLAEGWEDYAVR 389

Query: 340 WTVQPWLFAAGRFPQ------PAWTGRPLGGNRLLIWGEQGIGDEIQFASLLPLLVRAGV 393
                  F +GR         P W G  L G RLL+W EQG+GDE+ F +LLP  +    
Sbjct: 390 -------FESGRLKPKHPLNIPEWDGGDLAGRRLLLWAEQGLGDELMFGALLPEALARFP 442

Query: 394 SCVLECEPRLVPLFARSLPEVEVVARGWPPDPSLTRTEAAAPDRAPIAA--QIPAGSLPR 451
             ++ECEPRLVPLF RS P                 T    P R P  A   +  GSLPR
Sbjct: 443 GTIVECEPRLVPLFQRSFP----------------GTTVRGPTRRPADADCHLGFGSLPR 486

Query: 452 LLADAGGVPRSAAPYLLADPARISGFRTANPA--GTLAVGIAWHTTN-PKHGRSRNIPLR 508
           LL     +      +L  DP R++ +R+   A    L +GIAW +       R     L 
Sbjct: 487 LLWPTAPLTPPPVGWLKPDPMRVAAWRSRLEALGPGLKIGIAWTSQRLTTERRQSYTELE 546

Query: 509 VLAHALHRPGVRLVVLQYGDWTQEIAALTAD-GIDIGGLPGLDPWGDLDGLAAAVAAVDL 567
             A  L  PG+  V LQY     EIAA+    G+ +   P LD   DL+G AA +A +DL
Sbjct: 547 DWAPLLRLPGLHAVSLQYDGREAEIAAIEQRLGVCVHRWPDLDQIADLEGTAALMANLDL 606

Query: 568 VVSIDNVTVHLAGALGRPTCALLPYAAEWRWLRDRTDTPWYPTVTLCRQQAPKDWSVPLR 627
           VV++ +    +A ALG P   L     +W  L      PW+P++   +  A  +    +R
Sbjct: 607 VVTVASSAGEMAAALGTPVWRL--GRRDWTQLGTAV-RPWFPSMRCIQPDAGDNIKDAIR 663

Query: 628 LARQRLDELAGG 639
            A Q L   + G
Sbjct: 664 KAVQLLTRHSAG 675