Pairwise Alignments

Query, 254 a.a., 23S rRNA (uridine(2479)-2'-O)-methyltransferase from Azospirillum sp. SherDot2

Subject, 243 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Escherichia coli ECRC98

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 8/152 (5%)

Query: 103 MPAIDLSQPPQGLELLCALGDPSNLGALLRSAAAFGVSRVVLLEGAAHPFHPKCLRAASN 162
           +P +  S     L +L  + DP NLGA LRSA A GV  V++ +  +   +    + A  
Sbjct: 85  LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACG 144

Query: 163 AQFTLTLLRGPRWTAVNEAAGP--LYALDGGGE---DLTRFDWPADMRLILGEEGQG--- 214
           A  ++ L+R               ++ +   GE    L +      + L++G EG+G   
Sbjct: 145 AAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRR 204

Query: 215 VPADCPATRLSVPTTGAVESLNATVAVSVALF 246
           +  +     +S+P  G+V SLN +VA  + LF
Sbjct: 205 LTREHCDELISIPMAGSVSSLNVSVATGICLF 236