Pairwise Alignments

Query, 254 a.a., 23S rRNA (uridine(2479)-2'-O)-methyltransferase from Azospirillum sp. SherDot2

Subject, 252 a.a., putative tRNA/rRNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 67/255 (26%), Positives = 106/255 (41%), Gaps = 36/255 (14%)

Query: 23  LESRGLKKNGK----FLLAGLKTVPEALRQHPERFERLLFTDPAQISSW-RLPPGVEPVQ 77
           + S  LKK  K    FL  G K   + L   P RF        A  SSW +  P ++  +
Sbjct: 10  IHSLELKKTRKEEQVFLAEGPKLTGDLLGHFPCRFL-------AATSSWLQAHPDIQANE 62

Query: 78  LAPALFRMLD-VSGTGFPLLVGAVPKMPAIDLSQPPQGLELLCA----LGDPSNLGALLR 132
           +A      L   S    P  V AV + P   LS P    + LC     + DP NLG ++R
Sbjct: 63  IAEVSQEELSRASLLKTPQQVLAVFEQPQYTLS-PDFARQSLCLALDDIQDPGNLGTIIR 121

Query: 133 SAAAFGVSRVVLLEGAAHPFHPKCLRAASNAQFTLTLLRGPRWTAVNE-----AAGPLYA 187
            A  FG+  ++  +     ++PK ++A       + +     +T++ E        P++ 
Sbjct: 122 LADWFGIEHIICSQNTVDVYNPKTIQATMGGIARVKV----HYTSLPEFIHSLGDAPVFG 177

Query: 188 LDGGGEDLTRFDWPADMRLILGEEGQGVPADCPA---TRLSVPT----TGAVESLNATVA 240
               GE++       +  +++G EG G+  +  A    +L +P         ESLN  +A
Sbjct: 178 TFLDGENMYEQPLSTNGLIVMGNEGNGIGKEVEALINRKLYIPNYPQGKETSESLNVAIA 237

Query: 241 VSV--ALFARYAAVK 253
            +V  A F R AA K
Sbjct: 238 TAVICAEFRRQAAWK 252