Pairwise Alignments

Query, 492 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 438 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score =  160 bits (405), Expect = 8e-44
 Identities = 100/261 (38%), Positives = 137/261 (52%), Gaps = 32/261 (12%)

Query: 139 AINRSQAVIEFTTEGIITRANDNFLKVMGYRLDEVVGKNHSMFVETAYRDSADYARFWET 198
           A+ RS AVIEF   G +  AN+ FL  MGY L +V GK+H  F E    +S +Y  FW  
Sbjct: 148 ALVRSTAVIEFDLNGNVLMANERFLNGMGYSLAQVQGKHHRTFCEPEEYNSPEYQNFWRR 207

Query: 199 LRRGEFQAAQYKRIAKSGKPVWIEGAYNPILDETGRIVKVVKFAVDVTAQVSLLNNLKIM 258
           L  GEF A ++KRI   G+ VW+E +YNP++D   ++ KVVKFA  +T QV+        
Sbjct: 208 LNAGEFVADRFKRIDSHGRVVWLEASYNPVVDANNKLYKVVKFATVITDQVN-------- 259

Query: 259 IDKNFGEVDRALRLSMGEAESANHAAGSTSASVQAVAASAEELVASIGEISQSMTRARAA 318
                             AE+AN  A STS    + A     +V    ++ + + +    
Sbjct: 260 -------------QEQAVAEAAN-IAYSTSLQTDSSAQRGTTVVTQAVDVMRDLAK---- 301

Query: 319 TDGAFDRTVTVAESTDRLAAAAQAMNGIVGMINSIAGQINLLALNATIEAARAGEAGKGF 378
                    T  E  + L   +  +  IV  I+ IA Q NLLALNA IEAARAGE G+GF
Sbjct: 302 ------HMQTAGEGIEALNEQSLVIGTIVKTISGIAEQTNLLALNAAIEAARAGEQGRGF 355

Query: 379 AVVASEVKNLANQAGKATEQI 399
           AVVA EV+ LA++  +AT++I
Sbjct: 356 AVVADEVRQLASRTSQATDEI 376



 Score = 48.5 bits (114), Expect = 5e-10
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 120 EWADAKDRLQNLDYAAQMTAINRSQAVIEFTTEGIITRANDNFLKVMGYRLDEVVGKNHS 179
           E +  ++ L +L    +  +++    V+   ++G I   N NF+  M Y+ +E++G++  
Sbjct: 9   ELSALREELSSLQQVKE--SLDSEMLVLTLDSDGRIQSVNHNFMGEMLYKGNELIGRHIE 66

Query: 180 MFVETAYRDSADYARFWETLRRGEFQAAQYKRIAKSGKPVWIEGAYNPILDETGRIVKVV 239
             V    +    + RF   L RGE  A   + +  +G   W+     P+    GRI    
Sbjct: 67  DIVPVHVKSDEFHRRFKTALSRGEHFAGTVRLLRGTGAEAWLRSIMQPVRSADGRIKHFS 126

Query: 240 KFAVDVTAQV 249
            ++ D+T  +
Sbjct: 127 IYSSDLTRTI 136