Pairwise Alignments

Query, 563 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  346 bits (887), Expect = 1e-99
 Identities = 194/380 (51%), Positives = 259/380 (68%)

Query: 182 LDAFSTHMITLMLVVGIGGIGMAVVISVAVSRSGIVKPITGITGTMSRLADGDLSVEVAG 241
           +D   +  + L +++ + GIG+   ++  + +  I  PI  +   M +L   D  V + G
Sbjct: 1   MDRVRSAKLRLSILITVAGIGLIGAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPG 60

Query: 242 KDRGDEIGGMARAVEVFRQNALDRARMAAAEEAERLDKERRTAAVERLVAGFDSSMSGIL 301
               +EIG MA ++ VFR   ++  R+ A  EAE  ++  R  A++ L   FD ++SG+L
Sbjct: 61  VGLTNEIGRMASSLAVFRDAMVETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVL 120

Query: 302 RTVSAAATELDATAQSMSHTAEQTNSQAASTAAAAEQASVNVQTVASATDELTASISEIS 361
             VS AATEL ATAQ M   AEQT  +A + AAAAE+AS +V+TVA+A +EL+ASI+EI+
Sbjct: 121 EVVSGAATELHATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIA 180

Query: 362 AQVSRSTTIAAQAVGEAQATNRQVQGLVEAAQRIGDVVKLITDIASQTNLLALNATIEAA 421
            QV++S+T A QA  EA+ TN  VQGL  ++ RIGDVV LI DIA+QTNLLALNATIEAA
Sbjct: 181 RQVAQSSTAAQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAA 240

Query: 422 RAGEAGKGFAVVASEVKNLATQTAKATEEIAGQIQAMQQATGEAANAITGIGGTITAINE 481
           RAGEAGKGFAVVA EVK LA QT KATEEI+ Q+ A+Q AT EA  AI  I G I  IN 
Sbjct: 241 RAGEAGKGFAVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINH 300

Query: 482 IATSIASAIEEQGAATGEIARNVQEAARGTEVVTANIAEVSQGATQTGSAATQVLGAAGE 541
           IAT+I++A+EEQ AAT EIARNV +A++GT  V+AN+  VS  A +T +AA QVL AA  
Sbjct: 301 IATAISAAVEEQSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQS 360

Query: 542 LSRQSEQMKIEVERFLAGIR 561
           LSR++ ++K  V+RFL G+R
Sbjct: 361 LSREATELKDVVDRFLEGVR 380