Pairwise Alignments

Query, 666 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 564 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

 Score =  250 bits (638), Expect = 1e-70
 Identities = 148/378 (39%), Positives = 221/378 (58%), Gaps = 7/378 (1%)

Query: 148 VEILGEPYYAAYDPIKDASGNPVGILYVGIKKAEVFKTFDDSMRFATMLVVLCAVVLAVP 207
           V +L   Y   Y P+    G+       G+   ++   + + +            VL + 
Sbjct: 156 VPLLKTNYVQRYQPLGLIVGS-------GVYTDDIDAAYHEFLTRTGAATAALIAVLVLI 208

Query: 208 GYLVSRRLLRPLGQLSHVMTALSSGDLTARVAGAERLDEIGAMSRSVLVFRDGMAEAERL 267
            +LV+R ++R L +L   MTAL++GD+      A R +EIG M++++ VF++       L
Sbjct: 209 AFLVNRDIVRSLHRLRDKMTALAAGDMGVTFPEATRRNEIGGMTQALQVFKENAQAKASL 268

Query: 268 RAEQERQRIEGEAQKRRALQSMADTVELESRHAVERVAARTQEMDHNAGAMAKSAGLVGA 327
            A Q  Q     A+KR A+  +A   E    + +  VA     ++  A  M ++A   G 
Sbjct: 269 EASQAEQAERAAAEKREAMTMLASHFEQTVGNLIHDVAGEADAIERRAQDMTRAADETGR 328

Query: 328 NAQNVAAAAAQALSNAQAVSSAAEQLSASIEEIGTQVGHAAGVTRAAVAASNRTETTIES 387
            A  V AA  Q  +N Q V++A E+L++SI EI  QVG +A + R AV ++ R    +E 
Sbjct: 329 LAGAVTAATEQTSANVQTVAAATEELTSSINEISRQVGSSAEIAREAVESAERANGKVEG 388

Query: 388 LSSAVGRIGDVAELIQGIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTSRS 447
           L+ AV RIG V  LI  IA+QTNLLALNATIEAARAGEAG+GFAVVA EVK LANQT+++
Sbjct: 389 LAGAVERIGAVVGLINSIASQTNLLALNATIEAARAGEAGRGFAVVANEVKALANQTAQA 448

Query: 448 TEEISRLIAEIQSVTARSVEEVRDISRTIGEIDAISGTVAAAVEQQASATQEISRNVAQT 507
           TEEI+  +A IQ  T ++V E+RD+++ IG ++ ++ ++A+AVEQQ +AT+EISRN+ Q 
Sbjct: 449 TEEIATQVAAIQGETTQAVREIRDVAQVIGRVNDVATSIASAVEQQGAATREISRNIQQA 508

Query: 508 AGAATDVSTRIDEVSREA 525
           A  + +VS+ I  V+  A
Sbjct: 509 ARGSHEVSSSIGGVNEAA 526



 Score = 45.8 bits (107), Expect = 5e-09
 Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 50/261 (19%)

Query: 231 SGDLTARVAGA---------ERLDEIGAMSRSVLVFRDGMAEAERLRAEQERQRIEGEAQ 281
           + D T R+AGA           +  + A +  +    + ++      AE  R+ +E   +
Sbjct: 322 AADETGRLAGAVTAATEQTSANVQTVAAATEELTSSINEISRQVGSSAEIAREAVESAER 381

Query: 282 KRRALQSMADTVELESRHAVERVAARTQEMDHNAGAMAKSAGLVGANAQNVAAAAAQALS 341
               ++ +A         AVER+ A    ++    ++A    L+  NA   AA A +A  
Sbjct: 382 ANGKVEGLAG--------AVERIGAVVGLIN----SIASQTNLLALNATIEAARAGEAGR 429

Query: 342 N----AQAVSSAAEQLSASIEEIGTQVGHAAGVTRAAVAASNRTETTIESLSSAVGRIGD 397
                A  V + A Q + + EEI TQV    G T  AV         I  ++  +GR+ D
Sbjct: 430 GFAVVANEVKALANQTAQATEEIATQVAAIQGETTQAVRE-------IRDVAQVIGRVND 482

Query: 398 VAELIQGIAAQTNLLA--LNATIEAARAGE-------------AGKGFAV---VAGEVKN 439
           VA  I     Q       ++  I+ A  G              AG+   V   V   V+ 
Sbjct: 483 VATSIASAVEQQGAATREISRNIQQAARGSHEVSSSIGGVNEAAGRNGTVAYEVLENVRE 542

Query: 440 LANQTSRSTEEISRLIAEIQS 460
           L+ QT     E+ R +A++++
Sbjct: 543 LSMQTESLRGEVGRFLAQVRA 563



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 10/162 (6%)

Query: 394 RIGDVAELIQGIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTSRSTEEISR 453
           R  ++  + Q +          A++EA++A +A +  A     +  LA   S   + +  
Sbjct: 244 RRNEIGGMTQALQVFKENAQAKASLEASQAEQAERAAAEKREAMTMLA---SHFEQTVGN 300

Query: 454 LIAEIQSVTARSVEEVRDISRTIGEIDAISGTVAAAVEQQASATQEISRNVAQTAGAATD 513
           LI ++           +D++R   E   ++G V AA EQ        S NV   A A  +
Sbjct: 301 LIHDVAGEADAIERRAQDMTRAADETGRLAGAVTAATEQT-------SANVQTVAAATEE 353

Query: 514 VSTRIDEVSREAKVTEERADVLRAGASEVTHSIDELMHVLVR 555
           +++ I+E+SR+   + E A      A      ++ L   + R
Sbjct: 354 LTSSINEISRQVGSSAEIAREAVESAERANGKVEGLAGAVER 395