Pairwise Alignments

Query, 1454 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1223 a.a., translocation/assembly module TamB from Pseudomonas fluorescens SBW25

 Score = 85.1 bits (209), Expect = 4e-20
 Identities = 187/825 (22%), Positives = 320/825 (38%), Gaps = 119/825 (14%)

Query: 692  LLATGRLEGKLPNLNGLSALAGMPLGGGASFTLALDGKGGKQA-ANLTADASDLRVEGQG 750
            L + G  + +   LN    L G   G  A      DG G +   ANL     D R+ G G
Sbjct: 456  LRSKGEFKNEHLKLNADLDLKGRLRGQTAVLAAKADGAGEQWTLANLDIRLGDNRINGSG 515

Query: 751  E-----GGGGPLLTAR----------RLTAKADVADALGTPSGKTRVEMTDGNAAGTELR 795
                   G   +  AR          ++  + DVA +L  P GK  ++      A   L+
Sbjct: 516  SLQQRLAGQIDIKLARLAQLWPQLRGQVNGRLDVAGSLKAPQGKLGLKGQQLAFADNRLQ 575

Query: 796  SVT--ASVDGS------LAKAGFQA--------TAAGAG---AQPVALDLAGNLTQ---- 832
            S+T  AS+D +      L   G Q+        TA+  G    Q V LDL G L +    
Sbjct: 576  SLTLDASLDNAQRAKIDLKGNGIQSGDTQVGTLTASAQGDIQQQKVQLDLVGPLVKLALA 635

Query: 833  -EGQVT----RIRLDRLQARYAGEDLRTTAPATI-LLADRRYEVKELRLSSGNARLAADL 886
             +G +     R RL     +  G+D +  APA I  LAD +         SG A L  + 
Sbjct: 636  LDGTLDKGNWRGRLASGDVQAGGQDWKLQAPAKIERLADGKLTFAAHCWVSGPASLCGE- 694

Query: 887  GLNGDRLSGE----LTIDRLPL-ALAKLASPTLALDGVANARASLGGTLRNPRADATLRV 941
                 RL  E      + + P+ +LA       A  G  NA   L      P+   ++  
Sbjct: 695  ---DQRLMPEPKLRYHLKQFPIDSLAAFLPKDFAWQGKLNADLQLDLPDSGPKGLVSVDA 751

Query: 942  SG--LKVQQTTQ-AGLP----GIDATLDAQWRDRRLSLNGRIAMPKNAGTLTASAALPLV 994
            SG  L+V+   Q    P     ++ TL+ +  D +L+  G        G L   A +   
Sbjct: 752  SGGILRVKDKDQWLDFPYDTLKLETTLNPKRIDTQLNFRGG-----KLGELMLQAQI--- 803

Query: 995  MNPDSYAVSVPPNGALEAAVNGTVDLSLANDLLAASGDRARGSLRLDVRAGGTVGKPALG 1054
             NP      +  N +L       +DL++A   +    +   G L  + R  G +  P + 
Sbjct: 804  -NPLPKNKPIIGNFSLVG-----LDLAVARPFVPMV-ETLSGKLNGNGRISGGLLAPQVN 856

Query: 1055 GSVVLANGRYENRASGAVIT--NIEARLAGDGDVFTIQSFRG-RTRNGGAISASGVIRPG 1111
            G+V L  G          +   N++A +AG+    ++Q   G R+   G  S  G I  G
Sbjct: 857  GNVNLVGGEIAGPELPISLEGLNVQALIAGE----SVQLNGGWRSGKAGQGSLKGQIDWG 912

Query: 1112 APADRQLDIALQADNARLVEIDLVTAEIGANLTLTGGFANARLAGPVDIRRAEIQVPDRM 1171
                  +D++LQ     +        E+  +L ++       +AG V I R +I V +  
Sbjct: 913  QAL--VVDLSLQGSQLPVTVEPYAVLEVAPDLKISLKNDKLAVAGKVHIPRGDITVRELP 970

Query: 1172 PANVVDLKVTEVGKGRRARGTTQVSTAGGTRRVPQPAETPPAATTFVLALDM-TVNAPNQ 1230
            P+ V     T +   +   G                   PP A    +A+D+  V   ++
Sbjct: 971  PSTVKVSDDTVIIGSQTEEGK------------------PPMA----MAMDIDVVVGEDK 1008

Query: 1231 IFVRGRGLDAELAGNLRVKGTAAAPEVTGRFNILKGSLNLLAKNFEFKRGIFDFDGTQPI 1290
            +   G GL A++ G + +       +  G   +  G      +  + +R    F G  P+
Sbjct: 1009 LNFSGFGLTAKVQGQVHIGDNL---DTRGELWLNDGRYRAYGQRLDVRRARLLFAG--PL 1063

Query: 1291 D-PRLDLLAEATANGITADVVVSGTARQPKIELTSPQGLPQDEVLAGVLFGKSVGDLSAA 1349
            D P LD+ A    + + A + +SG+A QP  ++ S   + Q++ L+ ++ G+ +   +  
Sbjct: 1064 DQPYLDIEAIRKTDDVVAGIRLSGSAEQPTTQIFSEPAMSQEQALSYLVLGRPLSS-TGE 1122

Query: 1350 EAVQLAQSAAALAGVGGGGGGILDTVRRSLGVDRLDFTQGENGKGGAVQAGRYVSDRVYV 1409
            +   LAQ+A  L  +  G  G+   +   LG+   D     +G   AV A   ++++  +
Sbjct: 1123 DNNMLAQAALGLGLM--GSAGVTSDLANKLGIQDFDLDTQGSGNNTAVVASGKITEK--L 1178

Query: 1410 GVEQGIGANQSRAKVEVDITKNLKGTASVGANSETKFGVVYEKDY 1454
             +  G+G  +  + + +    + K    V +   +   + Y++D+
Sbjct: 1179 SLRYGVGVFEPASTIALRYLLSKKVYLEVASGVASSLDIFYKRDF 1223



 Score = 32.0 bits (71), Expect = 4e-04
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 239 PPIELALKGDGTLD--DWTGKLTAMAGEAASPSGTLNADATIKKGPEGHALTLAA 291
           P ++LAL  DGTLD  +W G+L +   +A      L A A I++  +G  LT AA
Sbjct: 628 PLVKLALALDGTLDKGNWRGRLASGDVQAGGQDWKLQAPAKIERLADG-KLTFAA 681