Pairwise Alignments

Query, 1454 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECRC98

 Score = 75.9 bits (185), Expect = 2e-17
 Identities = 171/746 (22%), Positives = 271/746 (36%), Gaps = 130/746 (17%)

Query: 725  ALDGKGGKQAANL----TADASDLRVEGQGEGGGGPLLTARRLTAKADVADALGTPSGKT 780
            AL G GG     +    T +A  L  +    G     LT  ++  + D+       +GK 
Sbjct: 552  ALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELTVAQVRVEGDIKST-DQIAGKL 610

Query: 781  RVEMTDGNAAGTELRSVTASVDGSLAKAGFQATAAGAGAQPVALDLAGNLTQEGQVTRIR 840
             V +   +     +  VT +  GS  +   Q    G   +PV+    G L   G   R +
Sbjct: 611  DVRVEQISQPDVNINLVTLNAKGSEKQHELQLRIQG---EPVS----GQLNLAGSFDR-K 662

Query: 841  LDRLQARYAGEDLRTTAPATILLADRR--YEVKELRLSSG-------NARLAA----DLG 887
             +R +   +    +T      L  D    Y  KE ++S G       NA L      D G
Sbjct: 663  EERWKGTLSNTRFQTLVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAG 722

Query: 888  LNGDRLSGELTIDRLPLALAKLASP-TLALDGVANARASLGGTLRN---PRADATLRVSG 943
              G  +   + ++R  LA+ K   P T    G+   +A +         P+   TL    
Sbjct: 723  AEGRAV---VNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTEEGLPQGSITLSGRN 779

Query: 944  LKVQQTTQ-AGLPGIDATLD--AQWRDRRLSLNGRIAMPKNAGTLTASAALPLVMNPDSY 1000
            ++V QT   A LP    TL+  A+ R+ R  L   I +  N                D  
Sbjct: 780  VQVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQF-------------DGQ 826

Query: 1001 AVSVPPNGALEAAVNGTV---DLSLANDLLAASGDRARGSLRLDVRAGGTVGKPALGGSV 1057
                 P G      N  +   +L++ N +    G++A G +  ++R GG V  P L G +
Sbjct: 827  VQVTDPQGRRNLGGNVNIRNFNLAMINPIFTR-GEKAAGMVSANLRLGGDVQSPQLFGQL 885

Query: 1058 VLA----------------------NGRYENRASGAVITNIEARLAGDGDVFTIQSFRGR 1095
             +                       NG     A        E  L GD D   I+++R R
Sbjct: 886  QVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRAR 945

Query: 1096 TRNGGAISASGVIRPGAPADRQLDIALQADNARLVEIDLVTAEIGANLTLTGGFANARLA 1155
                G+      +R   P   ++D++             V  E   NL          L 
Sbjct: 946  VTAKGS-----KVRITVPPMVRMDVSPD-----------VVFEATPNLFT--------LD 981

Query: 1156 GPVDIRRAEIQVPDRMPANVVDLKVTEVGKGRRARGTTQVSTAGGTRRVPQPAETPPAAT 1215
            G VD+  A I V D +P + V +    V                      QP E  P   
Sbjct: 982  GRVDVPWARIVVHD-LPESAVGVSSDVVMLNDNL----------------QPEE--PKTA 1022

Query: 1216 TFVLALDMTVNAPNQIFVRGRGLDAELAGNLRVKGTAAAPEVTGRFNILKGSLNLLAKNF 1275
            +  +  ++ V+  N + +   GL A L G+L V        + G+ NI +G  +   ++ 
Sbjct: 1023 SIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDL 1082

Query: 1276 EFKRGIFDFDGTQPIDPRLDLLA----EATANGITADVVVSGTARQPKIELTSPQGLPQD 1331
              ++G   F G  P  P L++ A    +AT + + A V V+G A +PK E+ S   + Q 
Sbjct: 1083 IVRKGELLFSGP-PDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQ 1141

Query: 1332 EVLAGVLFGKSVGDLSAAEAVQLAQSAAALAGVG-GGGGGILDTVRRSLGVDRLDF-TQG 1389
              L+ +L G+ +     ++    A   + L G+G    G I+  +  + GV  L   TQG
Sbjct: 1142 AALSYLLRGQGL----ESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQG 1197

Query: 1390 ENGKGGAVQAGRYVSDRVYVGVEQGI 1415
                   V +G YV   + V    GI
Sbjct: 1198 VGDSSQVVVSG-YVLPGLQVKYGVGI 1222



 Score = 29.6 bits (65), Expect = 0.002
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 882 LAADLGLNGDRLSGELTIDRLPLALAKLASPTL-----ALDGVANARASLGGTLRNPRAD 936
           L  +LG N   + GEL +  L L  A + +P L      L G A     + GT+  P+  
Sbjct: 518 LHLELGPNSAEVKGELGVKDLNLD-ATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLL 576

Query: 937 ATLRVSGLKVQQTTQA 952
           A +   GL+ Q+ T A
Sbjct: 577 ADITARGLRWQELTVA 592