Pairwise Alignments

Query, 563 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 567 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  304 bits (778), Expect = 7e-87
 Identities = 214/578 (37%), Positives = 324/578 (56%), Gaps = 33/578 (5%)

Query: 4   ISNLSVKSRTLLAILTLLVCTAGLGIFSLIKLSTINEEAADVRDNWLPSVSAISRLYTTF 63
           I  L +  +  LA   L++   G+G F+L+ L    +      D  +     +S L +  
Sbjct: 5   IKKLGLSWKVQLAPAFLVLVMIGIGAFALVSLRDNQQNV----DKLVSGPVRLSELASDL 60

Query: 64  DYYRTLEGAHLI-----ASTDEDIRSEDKALLESADRIEQRRM---DYQKLLTPGWETET 115
           +       A L      A+ + D     K + E+   + Q      + +K L        
Sbjct: 61  NNAAWTAHAKLYRMAATAANETDAAKLTKVMKETTAAVAQIPAALGEVEKALGADAAKPP 120

Query: 116 YQKFVTSYQTYMKISREQLLPLSRKNDNDGAGAIYRGLSRDEFRTSKELLQS--LMDFNA 173
           +QK   +   Y K ++  +       D D   A+    S ++  T  + L S  ++  N 
Sbjct: 121 FQKLKAAVAGYQKQAKNAV----EMADGDAGSALLFIKSAEKSFTDIDSLVSDLILATND 176

Query: 174 AEGKRAADRGEQVYRTSKLWVTAILVLVVAICVGVAW--MIVNTVIRPIQTITSMMGRLA 231
           +  +  A  G  + R    W+   +V   A+ VG+A+  +I   + RP+  ++  M  LA
Sbjct: 177 SRDREIAHTGIALEREQ--WMLGGIVAAAAL-VGIAFSFLIGRGIARPVVAMSGAMRDLA 233

Query: 232 DRDMTVSIDGTDRADELGAMARAVQVFKDNMIEADRLAAAEAAEQQ------AKTRRAQA 285
             +  V + G DR DE+G MARAV+ FK   ++A   A  E AE+Q      A++RRA+ 
Sbjct: 234 AGNFGVQLPGLDRGDEVGQMARAVEEFK---VQAVAKAEREQAERQRQEQIAAESRRAE- 289

Query: 286 VERLLTGFENSSTAALRTVAAAASELDATAHSMSAMAQQTSTQATVVASAAEQTSANVQT 345
           + +L  GFE +    +  V  A+  L+A+A +++  + +T   AT+VA+A+ QTS NVQ+
Sbjct: 290 LHQLADGFEAAVGQIVEQVGVASQALEASAGALAKGSAETQQLATMVAAASSQTSTNVQS 349

Query: 346 VATATEEMASSIREIGTQIARSADIAGKAVSEASQTSDAVRSLAEAAQKIGEVVGLITDI 405
           VA+ATE+M++S+ EIG Q++ S  IA +AV +A QT   +  LA+AA +IG+V  LIT I
Sbjct: 350 VASATEQMSASVEEIGRQVSESRKIADEAVQQAEQTDARIAKLAQAANRIGDVTQLITTI 409

Query: 406 ASQTNLLALNATIEAARAGEAGKGFAVVASEVKSLAGQTAKATEEIASQIGAIQQTTQGV 465
           A QTNLLALNATIE+ARAGEAG+GFAVVA EVK+LA QTAKAT+EI++QI  +Q  T+  
Sbjct: 410 AGQTNLLALNATIESARAGEAGRGFAVVAQEVKALAEQTAKATDEISAQIAEMQAATRES 469

Query: 466 VTAITGIGGTIGSINDITTAIAAAIEEQGAATNEISRNVQQAATGTQEVTTSIVQVTQAA 525
           V AI  IGGTIG I  I++ IAA++ EQG+AT EI+R+VQQAA GT +V  SI  V + A
Sbjct: 470 VDAIKEIGGTIGKIAHISSTIAASVGEQGSATQEIARSVQQAAIGTNQVAASIGNVNRGA 529

Query: 526 GEAGDAAGQVLSAAGDLSQQAELMRRDVEKFLSDIKAA 563
            + G A+ +VL++A  LS +   +R +V KFL+ ++ A
Sbjct: 530 ADTGAASDEVLTSAQLLSHENNRLRAEVAKFLATVRVA 567