Pairwise Alignments

Query, 548 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

Subject, 386 a.a., pyoverdine-specific efflux macA-like protein from Pseudomonas fluorescens FW300-N1B4

 Score =  112 bits (280), Expect = 3e-29
 Identities = 96/382 (25%), Positives = 167/382 (43%), Gaps = 74/382 (19%)

Query: 8   RAAIFLGLALSAAAGLSAYVVLARAEPGPAYRLARVEQGPLVSAITATGTMSALVTVEVS 67
           R A+F+ L L  AA L+A+ V+       A   A V +  + +++TA GT+     V+V 
Sbjct: 8   RRALFVALCLIPAAALAAWQVIPPGREKLA--TATVTRADIENSVTALGTLQPRRYVDVG 65

Query: 68  SQLSGQIAELYADFNSRVTSGQILARLNGDQLAARLAQAGADVDSAKAALIQQQALLDKA 127
           +Q SGQI +++ +   +V  GQ+L  ++     A+L      +D+ KA L +Q+A     
Sbjct: 66  AQASGQIQKIHVEAGDQVKEGQLLVEIDPSTQKAKLDAGRFSIDNLKAQLQEQRA----- 120

Query: 128 RADLANANASIANADAQIVRADLAQRDAERDLWRRRDLQGRGVVAAADLEKAETAAHSAQ 187
                              + DLAQ+  +R    +++L+  G     D++ A     + Q
Sbjct: 121 -------------------QHDLAQQKYQR----QQNLKAGGATREEDVQTARAEVRARQ 157

Query: 188 AQLIAARAQKRQAEAAEASAEASLAVAAAQVEVARAQVAQREAALQLVRVDLNRSVIRSP 247
           A+                            +++ +AQ+ Q +A+L+    +L  + I +P
Sbjct: 158 AR----------------------------IDMFQAQIRQAQASLRSDEAELGYTRIYAP 189

Query: 248 IDGVVVNRAVSTGQTVAASLSAPTLFTIAQDLRQMEVLANIDEADIGRVREGMAVRFTVN 307
           + G VV      GQT+ A    P +  IA+ L  M V A + EADIG+V+ GM   FT  
Sbjct: 190 MSGTVVAVGAREGQTLNAQQQTPLILRIAK-LSPMTVWAEVSEADIGQVKPGMTAWFTTL 248

Query: 308 AFPGDSFTGRVAQVRLAPKE---------------DQTVVTYIVVITVENPELRLLPGMT 352
           +     ++  V Q+   P                  + VV Y V++ V+N +  L+  MT
Sbjct: 249 SGGSRRWSSTVRQILPVPPRPLEQSQGSPTSGRSGSERVVLYTVLLDVDNADNALMTDMT 308

Query: 353 ANLRITVDERPSAVKLPNAALR 374
           A +     +  + + +P AAL+
Sbjct: 309 AQVFFVAQQAQNVLTVPTAALQ 330