Pairwise Alignments

Query, 244 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 222 a.a., Abasic site processing protein YedK from Escherichia coli ECRC100

 Score = 72.0 bits (175), Expect = 9e-18
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 20/208 (9%)

Query: 20  PNLMPRWNIAPTQDIPVIRREEDGRHLAMVRWGLVPPWADDAAIGGRMINARGESVADKP 79
           P  + R+N+AP   + ++   ++  HL  V WG  P W D       +INAR E+ A   
Sbjct: 30  PEPIGRYNVAPGTKVLLLSERDEHLHLDPVFWGYAPGWWDKPP----LINARVETAATSR 85

Query: 80  AFRDAFRKRRCLVPLDGFYEWTSVGEGAKPRKQGHVIRRRDRGLFALAGLWERWRGPKGA 139
            F+  ++  R +   DG++EW   G+    +KQ + I R D     +A +        G+
Sbjct: 86  MFKPLWQHGRAICFADGWFEWKKEGD----KKQPYFIYRADGQPVFMAAI--------GS 133

Query: 140 APLD--PPLETATVVTTATNATLSFLHDRMPVVLDPADWDAWLDPATPLQVLEGLIRS-- 195
            P +     E   +VT A +  L  +HDR P+VL P     W+      +    +  S  
Sbjct: 134 TPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPEAAREWMRQEISGKEASEIAASGC 193

Query: 196 APEEWLDVVPVGPKVNSVRNDDCSCLDP 223
            P       PV   V +V+N     + P
Sbjct: 194 VPANQFSWHPVSRAVGNVKNQGAELIQP 221