Pairwise Alignments

Query, 183 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas fluorescens FW300-N2E3

 Score =  114 bits (286), Expect = 7e-31
 Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 4/156 (2%)

Query: 19  DRAIASHVPRLRRYATALVGNRPDADDLVQDCVEKALANRHALRDPSKLGGWLMTILHNL 78
           D  +   +PRLRR+A +L  N  +ADDLVQ C+E+AL+     R    L  WL +IL+  
Sbjct: 5   DEPLRELIPRLRRFAVSLTRNPSNADDLVQSCLERALSGWGDKRPDGDLRAWLFSILYRQ 64

Query: 79  HISSQRGRRRRGAEVPVEELADDLALSAPPADRGAV-RDFVRAFAQLTDEHRTILLLTGM 137
            + + R  RR    +      DD   + P  +R  + +  ++AF +LT E R +LL   +
Sbjct: 65  FLDAHRRSRRYARMLEFFTGRDD---AQPSVERTVLAQSTLQAFDKLTTEQRALLLWVSV 121

Query: 138 EGLSYREVAEVLELPIGTVMSRLARAREKLRVLLDG 173
           EGLSY+EVAE+L++P GTVMSRL+RAR+ LR L DG
Sbjct: 122 EGLSYKEVAEILDVPTGTVMSRLSRARQALRQLSDG 157