Pairwise Alignments

Query, 561 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 561 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  313 bits (802), Expect = 1e-89
 Identities = 185/368 (50%), Positives = 253/368 (68%), Gaps = 8/368 (2%)

Query: 198 ISLLVAVAAGLVLRGSIATPIVAMTAAMARLAGGDRAVEVPGVGRRDEVGAMAEAVDVFK 257
           I ++ A+ A L+ R SI  P+ A+   M  LA G     +PGV R DE+GAMA+ V VFK
Sbjct: 198 IGVVCALVAWLISR-SITQPLGALGTRMTSLAEGQLDAPIPGVDRGDEIGAMAKTVQVFK 256

Query: 258 RNAIEADRLSAAQRAEEEAKARRAARLEELMRA----FEGNVTAVVQSLSGAATQMQQSA 313
            NAI   R+   ++ E+EA+ R AA    LM++    FE +V  VV+S++ A   MQ +A
Sbjct: 257 DNAI---RIRGLEQQEQEAQRRAAAERSALMQSIADDFERSVNGVVRSVADATRYMQSTA 313

Query: 314 GALTSTADETNRQSTTVASAAEQASANVQTVAAAAEELSSSIAEIGRQVTQSTRVAEQAV 373
            ++TSTA + + ++  V +A++ AS  V TVA+A+E+LSSS+ EI RQV QS  VA +AV
Sbjct: 314 QSMTSTAADASTRAAAVGAASDSASGMVGTVASASEQLSSSVQEISRQVDQSRSVASKAV 373

Query: 374 SGANRANGVVSGLADGAQKIGEVVDLINNIAAQTNLLALNATIEAARAGEAGKGFAVVAS 433
           S A + NG V  L+  A+KIGEVV LI++IA+QTNLLALNATIEAARAGE+G+GFAVVAS
Sbjct: 374 SDAEQTNGTVMQLSVSAEKIGEVVQLIHSIASQTNLLALNATIEAARAGESGRGFAVVAS 433

Query: 434 EVKSLANQTAKATEDITGQIATIQGATREAVSAIEEIGRIITEISQISATIASAVEQQSA 493
           EVK+LA+QTAKATE+I+ Q+A +Q +T  AV +I  I   I EI++I+  IA+AVEQQ A
Sbjct: 434 EVKALASQTAKATEEISAQVAAMQSSTASAVESIGGITATIGEINKITVAIATAVEQQGA 493

Query: 494 ATQEISRNVQEAAQGTQQVTSNIVGVTRAAGDTGRAAGEVRSVADHLTGESTRLRQEVES 553
           ATQEI+RN+Q  A G+ +++ +I GV+ AA  TG AA EV S A  L  +S  L+  V+ 
Sbjct: 494 ATQEIARNIQSVAAGSSEISDHIGGVSSAAQATGDAASEVLSHARALDSQSGALQSAVDD 553

Query: 554 FLNGVKAA 561
           FL  ++AA
Sbjct: 554 FLRKIRAA 561