Pairwise Alignments

Query, 561 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 447 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  314 bits (804), Expect = 5e-90
 Identities = 182/407 (44%), Positives = 256/407 (62%), Gaps = 1/407 (0%)

Query: 154 SAMDSIRALVRQIEDAERALLTARDAEQKTAFSTGYLTAIAGALISLLVAVAAGLVLRGS 213
           +A   I  L +    A   L+    + +  A S  YL + A  L+ +   +A  L++R S
Sbjct: 36  AATARIEVLKKAENTAANDLMFMASSIRLKAQSDLYLISAAMVLLMVGGIIATALIIR-S 94

Query: 214 IATPIVAMTAAMARLAGGDRAVEVPGVGRRDEVGAMAEAVDVFKRNAIEADRLSAAQRAE 273
           + TP  A+TA ++++A G++   VP + R DE+G MA  + VF+   +  D + A Q AE
Sbjct: 95  VVTPFTALTATISKIASGEKNTAVPCLEREDEIGEMARVIMVFRGALLSNDTMQARQIAE 154

Query: 274 EEAKARRAARLEELMRAFEGNVTAVVQSLSGAATQMQQSAGALTSTADETNRQSTTVASA 333
              +  R  R E+L   F+  ++  V  L+ ++T++  +A  +   A +T  +ST VA+A
Sbjct: 155 GAFRETRILRREQLTTEFDERISQFVGVLASSSTELVATANEMARVAGDTTSRSTAVAAA 214

Query: 334 AEQASANVQTVAAAAEELSSSIAEIGRQVTQSTRVAEQAVSGANRANGVVSGLADGAQKI 393
           +E+ S N+QTVA+A EEL++S++EI RQV+QS  ++  AV  A R +G+V GL+D A KI
Sbjct: 215 SEETSVNIQTVASAVEELAASVSEITRQVSQSATISGNAVQEAERTDGIVMGLSDAANKI 274

Query: 394 GEVVDLINNIAAQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTAKATEDITGQI 453
           G V  LI NIA+QTNLLALNATIEAARAGEAGKGF VVA+EVK+LA QT KAT DI  QI
Sbjct: 275 GTVAALIENIASQTNLLALNATIEAARAGEAGKGFTVVANEVKNLAYQTVKATADIGEQI 334

Query: 454 ATIQGATREAVSAIEEIGRIITEISQISATIASAVEQQSAATQEISRNVQEAAQGTQQVT 513
            +IQ AT  +V AI  IG  I EI+ IS  IASAVE+QSAAT EISRNV EA++    V 
Sbjct: 335 RSIQEATSASVEAIRTIGGTIREINGISTAIASAVEEQSAATSEISRNVHEASKAVNDVN 394

Query: 514 SNIVGVTRAAGDTGRAAGEVRSVADHLTGESTRLRQEVESFLNGVKA 560
            NI  V+  A  TG AA +V   A  ++ +S  +R++V  FL+G+K+
Sbjct: 395 KNIADVSSGASQTGAAASQVLQAAGDVSKQSELIRKDVVQFLSGIKS 441



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 55/308 (17%), Positives = 115/308 (37%), Gaps = 22/308 (7%)

Query: 70  RGYLVSGDPAFLQPYRSGAQAFDRALAEVKSLTADNPQQQARLEELRRHAATWRETVADK 129
           RG L+S D    +    GA    R L   + LT +  ++ ++   +   ++T     A++
Sbjct: 138 RGALLSNDTMQARQIAEGAFRETRILRR-EQLTTEFDERISQFVGVLASSSTELVATANE 196

Query: 130 EIALMSKADTREEARAMEAKALG------KSAMDSIRALVRQI-EDAERALLTARDAEQK 182
              +     +R  A A  ++          SA++ + A V +I     ++   + +A Q+
Sbjct: 197 MARVAGDTTSRSTAVAAASEETSVNIQTVASAVEELAASVSEITRQVSQSATISGNAVQE 256

Query: 183 TAFSTGYLTAIAGALISLLVAVAAGLVLRGSIATPIVAMTAAMARLAGGDR-------AV 235
              + G +  ++ A     +   A L+   +  T ++A+ A +     G+        A 
Sbjct: 257 AERTDGIVMGLSDAANK--IGTVAALIENIASQTNLLALNATIEAARAGEAGKGFTVVAN 314

Query: 236 EVPGVGRRD-----EVGAMAEAVDVFKRNAIEADRLSAAQRAEEEAKARRAARLEELMRA 290
           EV  +  +      ++G    ++      ++EA R       E    +   A   E   A
Sbjct: 315 EVKNLAYQTVKATADIGEQIRSIQEATSASVEAIRTIGGTIREINGISTAIASAVEEQSA 374

Query: 291 FEGNVTAVVQSLSGAATQMQQSAGALTSTADETNRQSTTVASAAEQASANVQTVAAAAEE 350
               ++  V   S A   + ++   ++S A +T   ++ V  AA   S   + +     +
Sbjct: 375 ATSEISRNVHEASKAVNDVNKNIADVSSGASQTGAAASQVLQAAGDVSKQSELIRKDVVQ 434

Query: 351 LSSSIAEI 358
             S I  I
Sbjct: 435 FLSGIKSI 442