Pairwise Alignments

Query, 357 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Azospirillum sp. SherDot2

Subject, 337 a.a., Holliday junction DNA helicase B (RefSeq) from Shewanella loihica PV-4

 Score =  384 bits (987), Expect = e-111
 Identities = 192/332 (57%), Positives = 255/332 (76%), Gaps = 4/332 (1%)

Query: 7   DRLV----QPGQGHGDSAEASIRPLSLAEFIGQRQARENLSIFIQAARSRNEALDHVLLF 62
           DRLV    Q  +   +  + ++RP  L E+ GQ   R  L +FI+AA+ R EALDH+L++
Sbjct: 5   DRLVHAQPQGTEERDEQIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAQKRGEALDHMLIY 64

Query: 63  GPPGLGKTTLAQIVARELGVGFRATSGPVIARAGDLAALLTNLQPHDVLFIDEIHRLNPA 122
           GPPGLGKTTLA IVA E+GV  ++TSGPV+ +AGDLAALLTNL+  DVLFIDEIHRL+P 
Sbjct: 65  GPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSPV 124

Query: 123 VEEVLYPAMEDFQLDLIIGEGPSARSIRIDLPPFTLVGATTRSGLITRPLRERFGIPVRL 182
           VEE+LYPAMED+QLD++IGEGP+ARSI+++LPPFTL+GATTR+G +T PLR RFGIP+RL
Sbjct: 125 VEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGALTSPLRARFGIPLRL 184

Query: 183 QFYEPDELELIVRRAAGVLGMGITPEGAREIANRARGTPRVSGRLLRRVRDFAAVAGVEE 242
           +FY   +L  IV R+A VL + I  EGA E+A R+RGTPR++ RLLRRVRD+A V    E
Sbjct: 185 EFYNVKDLSSIVTRSAKVLELPIDQEGAVEVARRSRGTPRIANRLLRRVRDYAEVKHDGE 244

Query: 243 VDKRVADAALTRLEVDRLGLDSMDRRYLGLVANNYGGGPVGVETLGAALGEQRDVLEEVV 302
           V+K VA++AL  L+VD  G D MDR+ L  + + + GGPVG++ L AA+GE+R+ +E+V+
Sbjct: 245 VNKVVAESALDMLDVDVEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVL 304

Query: 303 EPYLIQQGFLQRTPRGRMLTDQGFRYLGLNPP 334
           EP+LIQQGF+QRTPRGR+ T + +++  L  P
Sbjct: 305 EPFLIQQGFIQRTPRGRIATARAYQHFNLIQP 336