Pairwise Alignments

Query, 432 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Azospirillum sp. SherDot2

Subject, 465 a.a., C4-dicarboxylate transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  411 bits (1057), Expect = e-119
 Identities = 223/464 (48%), Positives = 308/464 (66%), Gaps = 40/464 (8%)

Query: 1   MNAAIIFGLLLALMLTGMPISISLGLTVLSFLFFMTDVPIDAVALKLF-TGIEKFEIMAI 59
           M  A +F +L   M  GMPI+I+LG + +  + F ++  + +VALKL+ +  E + ++AI
Sbjct: 1   MAIATLFCVLFICMFLGMPIAIALGFSSMLTILFFSNDSLASVALKLYESSSEHYTLLAI 60

Query: 60  PFFILAGNFLTHGGVARRMINFATSMVGHWHGGLGLAGVMACALFAAVSGSSPATVVAIG 119
           PFFIL+  FL+ GGVARR+I+FA   VGH  GGL +A VMAC LFAAVSGSSPATV AIG
Sbjct: 61  PFFILSSAFLSTGGVARRIIDFAMDCVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIG 120

Query: 120 SIILPAMVAQGFPKNFGAGIVTTSGALGILIPPSIVMVMYCVATTGHPQAASIGQMFIAG 179
           SI++  MV  G+P+ F +G++TTSG LGILIPPSIVM++Y  AT       S+ ++F+AG
Sbjct: 121 SIVIVGMVKAGYPEKFASGVITTSGTLGILIPPSIVMLVYAAAT-----EVSVAKIFMAG 175

Query: 180 VVPGILLACFLGFTTWFRARKFGYPRLPKASFAQRMHALRESFWGLLLIIVVMGGIYSGI 239
           +VPG+LL   +    +  AR    P +P   F +   +  ++  GL LI +V+G IY G+
Sbjct: 176 LVPGLLLGFLIMVVIYIVARIKNLPSIPFPGFKKLGVSSAKAIGGLALIFIVLGSIYGGV 235

Query: 240 FTPTEAAAMAAVYAFVVAVFVYKDM-PLRRVP---------------------------- 270
            +PTEA+A+A VYA+ +AVF Y+D+ PL+ V                             
Sbjct: 236 ASPTEASAVACVYAYFIAVFGYRDIGPLKNVAWRNPNEAIPSAIARNLGHMVLGLIKTPI 295

Query: 271 -----KVLLDSASMSAMLLYIITNAVLFSFLMTSEQIPQNMAAWILDQNMGVWVFLLVVN 325
                 V+ D A +S MLL+II NA+LF+ ++T+E+IP  +A +I+   +  W FL++VN
Sbjct: 296 DKEIRHVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAEYIVGMGLPAWGFLIIVN 355

Query: 326 IILLAAGNFMEPSSIVLIMAPILFPVAMKLGIDPVHFGILIIVNMEVGMCHPPVGLNLYV 385
           ++LLAAGNFMEPS+IVLIMAPILFP+A +LGIDP+H GI+++VNME+GM  PPVGLNL+V
Sbjct: 356 LLLLAAGNFMEPSAIVLIMAPILFPIATQLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFV 415

Query: 386 ASGITKMGITELTVAVWPWLLTMLIFLGLITYVPAITLWFPRLL 429
            SGIT   I  +  +V PWL+ ML FL LITYVP I+L+ P LL
Sbjct: 416 TSGITGRNIGWVIQSVLPWLVFMLAFLMLITYVPQISLFLPELL 459