Pairwise Alignments

Query, 259 a.a., Ribosomal RNA small subunit methyltransferase E from Azospirillum sp. SherDot2

Subject, 246 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Paraburkholderia sabiae LMG 24235

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 83/251 (33%), Positives = 118/251 (47%), Gaps = 22/251 (8%)

Query: 8   RLYVDSPLAEGQSVGLDHERAHFLRHVLRLDRGDSVAVFNGRDGEWRAVIDGFGKGWCSL 67
           R +V +P      V L  E    +R VLRL  GD+V++FNG  GE+ A I    +    +
Sbjct: 3   RFFVGTPFKTDDIVSLPDEVNRHVR-VLRLQPGDTVSLFNGNGGEYGAEIVDMDRHGTIV 61

Query: 68  TVAEQRREQDTTP-DLWLVFAPLKKGRIDFVAEKATEMGVSRLWPVFTRRTDPNRVNLDR 126
            + E R  +   P  L L        ++D++ EKATE+G     P+ T R+   R+  +R
Sbjct: 62  RIGEFRDIEAEPPYQLTLAQGIAGSDKMDWLIEKATELGACEFVPLTTTRSVV-RLAGER 120

Query: 127 LRANAVE-------AAEQCERLSVPEMGEAVPLDRALAGW-------PADRRLYLCAEAG 172
            +   V        + EQC R  +PE    V   R LA W       P D  L L     
Sbjct: 121 AQRRQVHWQRIVQASCEQCGRNRLPE----VMPTRELATWLSSMPKDPVDGELRLLLSPR 176

Query: 173 AARPVAEVLRDAPPGPAALLVGPEGGFDQSELDELAKLPFVVPVGLGPRILRADTAVVAA 232
           A+ P + +  + P   A +LVGPEGGF  +E    A   F+  VGLGPR+LR +TA +A 
Sbjct: 177 ASVPFSALPTEPPKVRALVLVGPEGGFSAAEEAAAASHGFMA-VGLGPRVLRTETAGIAV 235

Query: 233 LACWQSLAGDW 243
           L+   +  G W
Sbjct: 236 LSALAARWGGW 246