Pairwise Alignments

Query, 638 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 770 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  181 bits (458), Expect = 1e-49
 Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 30/386 (7%)

Query: 252 ALRLSEARNEAVLDTAAD-AILTVDEAGVLLSFNRAAEAMFGVAAGDLLWRPLDRLIPLA 310
           ALR +E R   ++D   D  I  +D  G + ++N  A+ + G    ++L +       L 
Sbjct: 263 ALRDNEERLRLIIDGVKDYGIFALDAQGYVTTWNAGAQRIKGYTEQEILGQHFS----LF 318

Query: 311 DLREEGGIRLEFAPGQTTALVARDRAAEAE----RADGIRFPVELSVSASEVEGR---RV 363
            L EE     + A  + T    RD     E    R DG RF   + ++A + +G    R 
Sbjct: 319 YLPEECPAHPDMALREAT----RDGHYMEEGWRCRKDGSRFWASVVITA-QYDGTGALRG 373

Query: 364 YTAILRDVTERRRAEAELLAAKEAAEAGNQAKSTFIATMSHELRTPLNAVIGFSQLLETQ 423
           ++ I RD+T+RR AE  L  A+E AE+ ++AKS F++ MSHELRTPLNA++GF+QLL+  
Sbjct: 374 FSKITRDITDRRAAEIALRTAREEAESASRAKSEFLSRMSHELRTPLNAILGFAQLLDMD 433

Query: 424 AGTAVAGGRQNDLVTDCVGAIRQAGEQLLAIIDDILDMARVDAGGFSLVEGSVNLSALIE 483
              + AG R        V  I +AG+ LLA+I+++LD+AR++AG   L    + L+ ++ 
Sbjct: 434 ---STAGQRPQ------VSHILRAGQHLLALINEVLDIARIEAGRLPLNIEPIPLATVLH 484

Query: 484 RVVADLRFHATRQGV-TVDVAADGDLPPIRGDDRRLGQALRNLLSNAIKFSHPGGAVSLS 542
             +  +   A   G+  +D+ A  D   +  D +RL Q L NLLSNAIK++ PGG V + 
Sbjct: 485 EALTLVSPMAADAGIHLIDLPALPDDSGVLADRQRLVQVLLNLLSNAIKYNRPGGEVRIE 544

Query: 543 AGLAADGWVELTVRDRGVGMRQEDVAQALTPFGQIDQTVTRRHEGIGLGLPLALRLVEAH 602
             + A   V + V D G G+  E + Q   PF ++      + EG GLGL L+  L+E  
Sbjct: 545 VSVQAH-QVSIAVHDTGHGIAPEQLGQLFKPFERLG--ADPQVEGTGLGLSLSKNLLEMM 601

Query: 603 GGTLTLDSAPGQGCTATIRLPPSRIM 628
            G L + S PG GC  T++LP ++++
Sbjct: 602 QGNLQVHSEPGHGCCFTLQLPATQVV 627



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 111 IGGLVLNIRDISDHIALSER-LRASEARYRTLAEAVP-VGILQADSAGQVQFANARLAGI 168
           IG L   + +    +A  ER LR +E R R + + V   GI   D+ G V   NA    I
Sbjct: 243 IGQLGTRLVEAGQLLAERERALRDNEERLRLIIDGVKDYGIFALDAQGYVTTWNAGAQRI 302

Query: 169 TGLEPDRLLGRGWLDAVHPED 189
            G     +LG+ +     PE+
Sbjct: 303 KGYTEQEILGQHFSLFYLPEE 323