Pairwise Alignments

Query, 598 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Azospirillum sp. SherDot2

Subject, 592 a.a., acyl-CoA dehydrogenase from Pseudomonas fluorescens SBW25-INTG

 Score =  491 bits (1263), Expect = e-143
 Identities = 284/607 (46%), Positives = 370/607 (60%), Gaps = 29/607 (4%)

Query: 3   YTAPVDDLRFVLNEVVGLDAI-AALPH-CDSAAPDLVDAILEEAGKFASGVLAPLNRVGD 60
           Y AP+ D+RFVLNEV  +    A LP   D+   + V+AILEEAGK  +  +APL+R GD
Sbjct: 4   YKAPLRDMRFVLNEVFEVATTWAQLPALADTVDAETVEAILEEAGKVTAKSIAPLSRGGD 63

Query: 61  KEGAKLENGVVRTATGWKEAYGQFTEAGWNSLPFEPEYGGQGLPWTVAFAVNEMWQAANL 120
           ++G + +N  V T  G+ +AY  + E GW  +  +P +GG G+P  V+  V EM  +++L
Sbjct: 64  EQGCRWDNTAVFTPDGFPQAYKTYAEGGWVGVGGDPAFGGMGMPKAVSAQVEEMINSSSL 123

Query: 121 SFGLCPLLTQGAVDLLTEHASDEQKAVYLSKMISGEWTGTMNLTEPQAGSDLAAVRTKAV 180
           +FGL P+LT GA   +  HAS++ KA YL KM SGEW G+M LTE  AG+DL  +RTKA 
Sbjct: 124 AFGLYPMLTSGACVSINTHASEDLKATYLPKMYSGEWAGSMCLTEAHAGTDLGIIRTKAE 183

Query: 181 RAGDGSYRITGQKIFITYGEHDLTENIVHLVLARLPDAPAGIKGISLFIVPKFLPNADGT 240
              DGSY+++G KIFIT GEHDLTENI+HLVLA+LPDAPAG KGISLF+VPKF+ NADG+
Sbjct: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGS 243

Query: 241 PGQRNDLRCASLEHKLGIMASPTAVMAYGDDEGAIGYLVGEENRGIEYMFTMMNNARLGV 300
            G+RN + C S+EHK+GI AS T VM + +   A+GYLVGE NRG+  MFTMMN  RLGV
Sbjct: 244 LGERNTVSCGSIEHKMGIQASATCVMNFDE---AVGYLVGEPNRGLAAMFTMMNYERLGV 300

Query: 301 GIQGVAIAERAYQQGRAYARSRVQSK---------DLADPRGSGVAIIKHPDVRRMLLDM 351
           GIQG+A  ER+YQ    YAR RVQS+          +ADP      II HPDVRRMLL M
Sbjct: 301 GIQGLASGERSYQNAIEYARDRVQSRAPTGAQAKDKVADP------IIVHPDVRRMLLTM 354

Query: 352 RAKTEAARALALYAGTQLDISRHHEDPAVRAAATARVDVLTPIVKAWSTDIGCEVASTGV 411
           +A  E  RA + Y  TQLDI++  ED   R  A   V +LTP+ KA+ +D+G E    G 
Sbjct: 355 KASNEGGRAFSTYVATQLDIAKFSEDAVARERADNLVALLTPVAKAFLSDLGLETTVLGQ 414

Query: 412 QIHGGMGFIEETGAAQHYRDARITPIYEGTNGIHGNDLTFRKTGRDKGAAARAFVADMRA 471
           Q+ GG G+I E G  Q  RD RIT IYEGTNGI   DL  RK     GA    F  ++RA
Sbjct: 415 QVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRA 474

Query: 472 TVEELGAAPGDDLAVIRTELSAGLDALDRAIDWMVATQAEGDLQGAAAGAVAYLKLWGTV 531
            +    A+ G +LA     L   +D LD    W V  +A+ +     A +V YL  +G +
Sbjct: 475 FI----ASAGPELAEFTKPLGVAVDNLDELTAW-VLDRAKTNPNEIGAASVEYLHAFGYM 529

Query: 532 AGGWMLARSAMKAMAGLRQPGANASFLESKLIVARFYAEQVLATAPALLPTIASARNTVM 591
           A  +M AR A  A+       +   F  SKL  ARFY  ++L    +L  ++ +   ++ 
Sbjct: 530 AYAYMWARMAKAALG----KESEEDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLF 585

Query: 592 ALSEEQF 598
            L E  F
Sbjct: 586 LLDEALF 592