Pairwise Alignments

Query, 386 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 323 a.a., TRAP transporter solute receptor, TAXI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 32/328 (9%)

Query: 13  GLLAGGLLGGPAAAQDLRYFRIGTGTTSGTYFPIGGLIANAISNPPGSRPCDKGGSCGIP 72
           G ++      PAAAQ+   F  G      +++     +A  ++N               P
Sbjct: 10  GAVSAAAFAMPAAAQERLAF--GATNAQSSHYAYFAALAKIVNN-------------AYP 54

Query: 73  GLIVVAQASNGS-VDNVEMLRAGTVEAGFAQADVAYWAYSGTGSFTGKRPFTELRSLGML 131
                +    G+ VDN++ +  G ++ G       Y A  G  +F       E R L   
Sbjct: 55  DKYQASVVETGATVDNLKRMDRGQLDIGLITTSALYHANEGIKTFADGA--IESRLLWAY 112

Query: 132 YAEAIQIVVRSDGFIDRMADLKGRSISLGEEGSGTLVEARLILDAYGLSESTITPLYLKP 191
                 ++VR D  ID +ADLKG     G+ GS T   ++ +L  +G+    +       
Sbjct: 113 SLAPQNVIVRRDAGIDSIADLKGVRFGPGQRGSSTEATSQEVLALFGVEPDWVRG---SN 169

Query: 192 GTAADRLAKGELDGFF--MVGGYPVAAVSDVAARVPIRLVPLDGEPADRLLRSQRFYIEQ 249
           G  A  +      GF    VG    A  +D+A   P++++P+   P D++   +    E 
Sbjct: 170 GELAAAIKDNRAVGFIKSAVGTKFDALTTDIATFTPVQVLPV---PEDKIAMIREELPEL 226

Query: 250 EI---PANAYPGSANTPTLSLGAELLTRADRDPDLIYGVVRALWHENTRRVLADGHPQGR 306
            I   P      +    T      +  R D D    Y +V+A+  ++T +  A   P   
Sbjct: 227 SIVDMPGGEMENTGAYQTWGFMIGVSARPDMDEQTAYDLVKAVMEDDTEQ--ATAFPPVA 284

Query: 307 NFDPA-RAVANVSVPLHPGAERFYREAG 333
             D A + +A  + PLHPGA R++ EAG
Sbjct: 285 GIDLAEQTLAYATSPLHPGAIRYFEEAG 312