Pairwise Alignments

Query, 386 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 335 a.a., TRAP transporter solute receptor, TAXI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  123 bits (309), Expect = 7e-33
 Identities = 95/319 (29%), Positives = 153/319 (47%), Gaps = 21/319 (6%)

Query: 24  AAAQDLRYFRIGTGTTSGTYFPIGGLIANAISNPPGSRPCDKGGSCGIPGLIVVAQASNG 83
           A A+   Y  + T +T GTY+P+G  ++  +       P  K G   I        +S G
Sbjct: 21  AKAEGANYI-LATASTGGTYYPVGVALSTLVKVK--LEPSQKIGMSAI--------SSAG 69

Query: 84  SVDNVEMLRAGTVEAGFAQADVAYWAYSGTGSFTGKRPFTELRSLGMLYAEAIQIVVRSD 143
           S +NV ++R G  + G  Q    Y+A +GTG          LRS+ ML+      VV +D
Sbjct: 70  SGENVRLIREGEAQFGIMQGLFGYYAATGTGPLEESGKQENLRSVTMLWQNVEHFVVAAD 129

Query: 144 ----GFIDRMADLKGRSISLGEEGSGTLVEARLILDAYGLS-ESTITPLYLKPGTAADRL 198
               G I+ +  LKG +++LG + SGT+     IL ++G+  ES    ++   G +A+ L
Sbjct: 130 AAPTGTIEDLVALKGEAMALGRQNSGTIGSNATILSSFGVDIESDYELVFGGYGPSAEAL 189

Query: 199 AKGELDGFFMVGGYPVAAVSDV--AARVPIRLVPLDGEPADRLLRSQRFYIEQEIPANAY 256
             G++ G     G PV A+S +  AA   + L+    E A +    +  +    I A  Y
Sbjct: 190 QNGQVKGIGTPAGVPVGAISQLMAAAGDSVTLLNFTPEQAAQADGGRELWTPYTIAAGTY 249

Query: 257 PGSA-NTPTLSLGAELLTRADRDPDLIYGVVRALWHENTRRVLADGHPQGRNFDPARAVA 315
           PG A +  T++    L T AD   + +Y + + + +EN   + A  HP  +      A+A
Sbjct: 250 PGQAEDVQTIAQPNFLATSADLPDEHVYQITKTI-YENLPFLNAI-HPATKAMAIESAIA 307

Query: 316 NVSVPLHPGAERFYREAGL 334
            + +PLHPGA+R+Y E G+
Sbjct: 308 GLPLPLHPGAQRYYEEVGI 326