Pairwise Alignments

Query, 551 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 656 a.a., phage terminase large subunit family protein from Erwinia tracheiphila SCR3

 Score =  328 bits (841), Expect = 4e-94
 Identities = 209/552 (37%), Positives = 284/552 (51%), Gaps = 45/552 (8%)

Query: 1   MLRDTPVLKPLMRPTRKGEKQDNATFYQLSNGASVRVVGAASDDAFRRYSARFLFADEID 60
           MLRDTPVL  +    +             +NGA++ +VGA S   FRR + R +  DE+D
Sbjct: 126 MLRDTPVLTAISGNPKAKSSNQTILKKSFTNGANLTLVGANSPGGFRRITCRIILFDEVD 185

Query: 61  GDGWTPGAKTQGDKLKLFWTRGETFWNRKQVRGSTPLLYETSRVWKLWLASDQRRYFVPC 120
           G     GA  +GD++ L   R ETFWNRK V GSTP +   SR+ K +L SDQRR+FVPC
Sbjct: 186 GYP-AGGAGAEGDQIALGTKRSETFWNRKIVLGSTPTVKGISRIEKAYLESDQRRFFVPC 244

Query: 121 PQCSDAAGQLDGWQYLDWGGPDVPHGLKWSLDAEGTLDKVWYVGTC---GCIVEERHKAW 177
           P C +       +Q L+WGG D P+G+KW  D+ G          C   GC++       
Sbjct: 245 PHCGE-------YQVLEWGGKDKPYGIKWEKDSSGNSHPETTYYLCRHSGCVIVHSDLPG 297

Query: 178 MDANGEWRPTARAKVPGHVGMHLWTGMSLNPNAAWTVIVQEWLEAQADPASLVQPFMNLR 237
           M   GEWR TA  +  GH G H+WTG S + NAAW  +V EWL  + DP  + Q F+N  
Sbjct: 298 MLVRGEWRATAPFR--GHAGFHIWTGYSPHANAAWPALVAEWLRVKDDPL-MRQTFINTT 354

Query: 238 LGRPYRAIYGQEVKSSSFIDRMEPYPAEVPAGVEFITVGVDVQSGKVNPRLEASVYGWGR 297
           LG PY       +   +   R E + AEVP G   +T GVD Q    + R E +V  WGR
Sbjct: 355 LGEPYEDAGDMALSERTLAARAEIWSAEVPDGAVILTAGVDTQ----DHRFEITVTAWGR 410

Query: 298 GLEVWLIGHFVLAGDPAKGEVWAALDEGVLLRRFRKPDGTTLDVRATCIDSGGHHTQEVY 357
             E W++ H V+ GD    E W  LD   L + +R+ DG    + A C DSGGHHT +VY
Sbjct: 411 NEECWIVAHDVILGDLETDEPWLRLD-AYLKQIWRRADGRGFALTAVCHDSGGHHTNKVY 469

Query: 358 AFANKRRSRRVWAIKGRSESRGQRAKVWP-RKPSSKLGHVW--YMIGGNAARDWAYGSLA 414
            F+ +R  R++WAIKG S   G+R+ VWP RK +S+    +   ++G N+A+D     L 
Sbjct: 470 EFSKERIGRKIWAIKGESAVAGKRSPVWPTRKVTSRTKSTFKPVILGVNSAKDDIRYRLH 529

Query: 415 VD-----KIGPRHVHFPQAAIDGARELDDEFFAQLTREKL--IVPRGQQYTVW-VKPSEA 466
           +      + G  ++HFP         LD  +++QL  E L   +  GQ+Y VW ++P  A
Sbjct: 530 LSPPDPGQAGAAYIHFPDF-------LDLGYYSQLLSESLETKISGGQKYRVWKLRPGRA 582

Query: 467 HEAGVCFVYAYAAVCGLQALSGKYVKLGEAEVDAAP-------AEASSDTDTEPTPADAI 519
           +EA  C VYAYAA+ GL     +   L +A +  AP       AE     D     A   
Sbjct: 583 NEALDCLVYAYAALKGLMHHGLRLNALADA-IQKAPERLLPPLAEPEEKIDLSEPGAVIP 641

Query: 520 AAAVARARRLSQ 531
            +     RRLSQ
Sbjct: 642 PSKKPGKRRLSQ 653