Pairwise Alignments

Query, 551 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 641 a.a., terminase, large subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 38/265 (14%)

Query: 116 YFVPCPQCSDAAGQLDGWQYLDWGGPDVPHGLKWSLDAEGTLDKV-------WYVGTCGC 168
           YFV CP+C         +Q + +   D   G+ W  + E    KV       +    CG 
Sbjct: 239 YFVRCPKCGV-------YQEMRFTHDDGEVGVVWP-EGERDYAKVNDQMLARYRCRGCGA 290

Query: 169 IVEERHKAWMDANGEWRPTARA---------KVPGHVGMHLWTGMSLNPNAAWTV--IVQ 217
           +  +  +    A GEWR              + P HV     T +S + + + T    +Q
Sbjct: 291 LWNDHDRDMAVARGEWRDPETGMEAMSWMLERRPRHVAFQYSTLISRDVSLSETAAKFIQ 350

Query: 218 EWLEAQADPASLVQPFMNLRLGRPYRAIYGQEVKSSSFIDRM-EPYPAE-VPAG--VEFI 273
              + +      ++ FMN  L  P+  + G E   +  + R+ +  PA  VP G  V  +
Sbjct: 351 ADRDRKLGDLQTLKDFMNGYLAEPW--VDGTEEGDAGAVMRLRDDRPAGLVPGGGQVACL 408

Query: 274 TVGVDVQSGKVNPRLEASVYGWGRGLEVWLIGH-FVLAGDPAKGEVWAALDEGVLLRRFR 332
              VD Q       + A  +GWG     W I + FV +  P   + ++ L+E +    + 
Sbjct: 409 LAAVDTQDNGFWYEIRA--FGWGLSATSWSIRNGFVPSASP---DDFSNLEEVLFNTVYE 463

Query: 333 KPDGTTLDVRATCIDSGGHHTQEVY 357
              G    V+A  ID+ GH T EVY
Sbjct: 464 DAQGLVYPVQAGVIDAMGHRTSEVY 488