Pairwise Alignments

Query, 320 a.a., HTH-type transcriptional regulator HdfR from Azospirillum sp. SherDot2

Subject, 285 a.a., HTH-type transcriptional regulator YofA from Alteromonas macleodii MIT1002

 Score =  166 bits (419), Expect = 8e-46
 Identities = 90/293 (30%), Positives = 160/293 (54%), Gaps = 13/293 (4%)

Query: 4   NLDTDLLRAFVAVADSASFTRAGERLGRTQAAVSQQVRRLEDTVGKRVFERDTHGVRMTR 63
           NL  D LR+FV +A + S+T+  E+L RTQ A+S Q+++LE+ +G+++F RD + + +T 
Sbjct: 3   NLSIDFLRSFVLIAQTGSYTQCAEQLQRTQPAISLQIKKLEEMIGEKLFSRDKNRLALTG 62

Query: 64  DGEVLLAYARRMLTLNDEVLALMHRSPTVASVRIGTPDDYATMLLPEILARFNAAYPDVM 123
            G  LL+Y  +++ LND+ +A   +     ++R+G P +++T L+P+I+ RF   YP++ 
Sbjct: 63  AGSRLLSYGEKIVALNDQAMAEFGKPQVTGNIRLGIPSEFSTTLMPKIIRRFTQTYPEIS 122

Query: 124 VEVVCDNSPDLVAEIEKGRYDLALITRKAGEAGGE-LVRQEPVSWVAPPLEPASPLPGGY 182
           +EV C  S DL++E  K ++DL L  ++  +   +  +  + + WV           G  
Sbjct: 123 LEVHCALSKDLLSEPLKSQFDLILSLQETPDPQQDGYIISDQLVWV-----------GSQ 171

Query: 183 RPVESLD-PLPLALFPKGCVVRDIAVAALDGIGRDWRVAFTSKSVVAVHGAVMGGLGVTA 241
           R V S+   LP+   P  C+ R  A   L  I + W+V +T   +  +  A+  GLG+T 
Sbjct: 172 RFVNSVPAKLPIIAAPSPCIYRKRATNLLSAIKKPWQVVYTIADLNGIQTAINEGLGITV 231

Query: 242 MEACTVPPSLRRIGAAEGFPDLPDVDIALHRARGTAPKPVRLLADAIHDLVGS 294
           +   +VP  L  +  +E  P+L  V + L   +  + K + LL + I + V +
Sbjct: 232 LAKSSVPSGLHVLSNSESLPELGHVGVCLVNPQKVSSKAISLLTETITNEVAN 284