Pairwise Alignments

Query, 282 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 302 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (557), Expect = 7e-62
 Identities = 117/275 (42%), Positives = 179/275 (65%), Gaps = 4/275 (1%)

Query: 9   SRFANLEFVLGAFLTTVICLAVVFSDVLFPGGADKIDLMARLAKP--FANAA--HPLGTD 64
           S FA+  F +GA L  +I L  +F+  L P      D+M R+  P   AN    + LGTD
Sbjct: 27  SSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWDYVLGTD 86

Query: 65  PLGRDVLARVVAGGKISLLVGFTSVIGAVIFGVAVGLVAGYYRGFWDMLVMRFADIQLAM 124
            LGRD L+R++ G +ISL +GF++ + + I G  +GL+AGY+ G  D L+      +LAM
Sbjct: 87  KLGRDYLSRLLYGARISLFIGFSAALISGIIGTIMGLLAGYFGGKTDALISYLITTRLAM 146

Query: 125 PFILLAITFIAIVGGSLTNTIILLIISQWVQYARLVRGSVLTLREREFILSARAIGVKDW 184
           P +++A+   +++GGSL   I+LL    W ++A +VR +V  +R+ E++ SA+A+G    
Sbjct: 147 PVVMIALASASLIGGSLKVVIVLLGCLLWDRFAVVVRAAVQQIRDAEYVASAQALGCSTL 206

Query: 185 RIILQHLLPNLIGPVIVLMTLNVANNILLESSLTFLGLGVDPTIPSWGGMLADGRTYLQT 244
           RI+   +LPNL+G +IV+ TL +A+ ILLES+L+FLG+GV P IPSWG M+A+G+ Y+  
Sbjct: 207 RILASEILPNLVGALIVVATLEMAHAILLESALSFLGVGVQPPIPSWGLMIAEGKPYMFF 266

Query: 245 AWWVSVFPGLAILLTVLGLNLLGDWLRDSLDPTGR 279
           + WV   PG+A+++ VLG+NL+GD LRD +   GR
Sbjct: 267 SPWVIAIPGVALMVLVLGINLVGDGLRDLILHDGR 301