Pairwise Alignments

Query, 240 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 234 a.a., Octopine transport system permease protein OccQ from Azospirillum sp. SherDot2

 Score =  191 bits (486), Expect = 8e-54
 Identities = 102/229 (44%), Positives = 144/229 (62%), Gaps = 1/229 (0%)

Query: 8   LQLLSPYPPGWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTT 67
           L+LLS  P GWGG LL G A T+A++  A+  GI++G  GA  KLS +  L ++ ++YTT
Sbjct: 2   LELLSFGPNGWGGQLLMGTAMTVAVAVSAFAFGILVGSLGASAKLSHSLALNVVADVYTT 61

Query: 68  AIRAVPELILIVGLYYAGTDGLNRLLQLMGLPP-LEVNGFVAAVAVLGFVQGAYMTEVLR 126
            +R +PEL++I  L++ G+     +    G    +++N F   V  +G + GAY TEV+R
Sbjct: 62  IVRGIPELLVIYLLFFGGSGVATSIASAFGYDGRVDLNAFTIGVLAVGLISGAYSTEVIR 121

Query: 127 GAILAVPNGQIEAARAFGMSPFLRFRRVVLPALLPNALPGLANLWLAVTKDSALVAVVGY 186
           GA+ +VP GQIEAARA GMS +L  RRV++P  L  ALPGL N+W    KD+ALV+V   
Sbjct: 122 GAVQSVPFGQIEAARACGMSRWLILRRVLVPQTLRFALPGLGNVWQLTLKDTALVSVTAL 181

Query: 187 QELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRG 235
            EL   T LA  +T+Q FLF+  AA LYL +T +S  +F++ E    RG
Sbjct: 182 AELMRITHLAAGATRQPFLFYSTAAVLYLMLTTISTALFNRAEISANRG 230