Pairwise Alignments

Query, 971 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 986 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  323 bits (827), Expect = 5e-92
 Identities = 189/469 (40%), Positives = 280/469 (59%), Gaps = 16/469 (3%)

Query: 499 WLQIRARPV--LGSNGEIIRCVGTITDITEQKNSVERLLQDAMNDNLTGLPNRQVFLDRL 556
           W ++   P+   G+ G ++  +    ++TE   + +RL   A  D+LTGLPNR +F +RL
Sbjct: 249 WFRVLVTPLEARGNRGAVVMHL----NVTETVEAQQRLTHLAHFDSLTGLPNRLLFRERL 304

Query: 557 QSILNLSPDSEGVRPTVMAIDIDRYKLVNDTLGIAAGDNILIALTRRLRRLLKPQDTLAR 616
           ++ L +    +G R  VM ID+DR+K+VNDTLG  AGD +L  +  R+   L+  DT+ R
Sbjct: 305 KAALAMV-QRQGGRLAVMFIDLDRFKVVNDTLGHLAGDALLQQVAARIGGCLRASDTVGR 363

Query: 617 LGGDEFGLILTSERDPQRVADFADAVNKAIMV---PINFANREIILTASIGLVSWIDQQE 673
           LGGDEF +++    DP+R  D      + +     PI    +E+ ++ASIG+  + D  +
Sbjct: 364 LGGDEFAVLVP---DPEREYDVTVVARRLVDTLAQPITLEGQELFVSASIGITLYPDDCD 420

Query: 674 SAAGLLSDAELAMYRAKRAGGNRVEPFRPAFRTSGTDRLQMESDLRRAIERKELSLAYQP 733
               L+ +A+ AMYRAK  G N  + F  A      ++LQ+E+DLRRA++R+E  L +QP
Sbjct: 421 DLEKLIRNADTAMYRAKELGRNNFQFFTAAMNARVKEQLQLETDLRRAVQRQEFILHFQP 480

Query: 734 IVKLDDGALAGFEALMRWEHPKRGNIPPSEFIPIAEASGLIEPLGMFALERAATDLMDWQ 793
            V    G + GFEAL+RW+HP RG + P EFIP+ E +GLI P+G + L++A      W 
Sbjct: 481 KVSCSHGGITGFEALLRWQHPVRGLVSPMEFIPLLEETGLIVPVGTWVLQQACQQAAAW- 539

Query: 794 HAIDKMPIFISVNISSAQLLNNELYNDVRGMLTRTRCNPQQLKLELTESVVMENPEQARL 853
           H      + ++VN+S+ QL +  L  DVR  L  +   PQ L+LELTES++M + E    
Sbjct: 540 HLAGHGQLTVAVNLSARQLQSEALVQDVRQALEDSGLPPQALELELTESLLMSHVEDNIA 599

Query: 854 VLSKLKETGLSLAMDDFGTGYSSLAYLTRFPFDTIKLDKALVAN-TSDKRNV-LLRSVIA 911
           +L++LK  G+ L++DDFGTGYSSLAYL R P DT+K+D+A V + T+D  +  + R+VI 
Sbjct: 600 LLNRLKAMGVQLSVDDFGTGYSSLAYLKRLPLDTVKVDRAFVQDITADPGDASITRAVIT 659

Query: 912 MARALDMQVVAEGIETPEDAAELARMNCHFGQSFMFGTPVSGDAALKLL 960
           MA  L ++VVAEG+ET    A L   +C   Q + F  PV    AL LL
Sbjct: 660 MAHNLRLKVVAEGVETEGQIALLVANHCDEMQGYYFSRPVPAPEALALL 708



 Score = 42.4 bits (98), Expect = 2e-07
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 421 DTVWDWDVTRDRIV-TTPDISNRLGLEPGTMHGAARNWLPRLHPDDRDRFKATLDVLLDH 479
           ++ W  D+   R+V   P  +   G     ++    +WL  +HPDD DR +   + +  +
Sbjct: 37  ESFWLIDIAARRVVYANPAYATHWGGSVEDLYRNRFDWLRFIHPDDLDRMR---EAVRRN 93

Query: 480 RKGRLNHEFRIRAEDGHFHWLQIRARPVLGSNGEIIRCVGTITDITE 526
            +G +N   RI   +G   WL IR+  +    G      G  TDIT+
Sbjct: 94  PRGGVNEVVRIVHPNGGERWLHIRSFDMKDEQGNAHSVGGVGTDITD 140