Pairwise Alignments

Query, 364 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 364 a.a., microcin C ABC transporter permease from Escherichia coli BL21

 Score =  455 bits (1170), Expect = e-132
 Identities = 221/373 (59%), Positives = 288/373 (77%), Gaps = 20/373 (5%)

Query: 1   MGAYILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLT-----------GQGDSA 49
           MGAY++RRL L+IPT+  I+ I+F ++Q APGGPV+Q +A +            G+G  A
Sbjct: 1   MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRA 60

Query: 50  SDRLSGGGDLMGQSGGFDESGSKYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYI 109
           S   +G G++         S S YRG +GLDPE+I ++  ++GFDKP   R+ +M+W+YI
Sbjct: 61  SHAQTGVGNI---------SDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYI 111

Query: 110 RFDFGDSFFRNSSVIDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTS 169
           RFDFGDS FR++SV+ LI D LPVS +LG W  +I Y++SIPLGI+KAV +GS FDVW+S
Sbjct: 112 RFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSS 171

Query: 170 GIIIIGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLP 229
             IIIGYA+P+FLF ILLIV FAGGS+FD FPLRGLVS NFD L W+QKI DY WH+TLP
Sbjct: 172 AFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLP 231

Query: 230 LIALSLSAFATTTLLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFP 289
           ++A  +  FA  T+LTKNSF+DE++KQYVVTARAKG+SE+ +L+ HVFRNAML+VIAGFP
Sbjct: 232 VLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFP 291

Query: 290 GAFISAFFTGSLLIENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLI 349
             FIS FFTGSLLIE +FSL+GLG LGY + V+RDYP++FGTL+IF+L+GL++ ++SD+ 
Sbjct: 292 ATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDIS 351

Query: 350 YTWIDPRIDFERR 362
           YT +DPRIDFE R
Sbjct: 352 YTLVDPRIDFEGR 364