Pairwise Alignments

Query, 570 a.a., Single-stranded-DNA-specific exonuclease RecJ from Acinetobacter radioresistens SK82

Subject, 571 a.a., single-stranded-DNA-specific exonuclease RecJ (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  259 bits (662), Expect = 2e-73
 Identities = 203/565 (35%), Positives = 298/565 (52%), Gaps = 37/565 (6%)

Query: 21  VSPFLAHILARRGVASEQELELRLKYLLSPCLK---------GLEQAVEIINQAIDQQKK 71
           VS  +  +L RRGV S  ++ L     LSP L+         GLEQA   +   +     
Sbjct: 27  VSELIVRLLWRRGVGSVDDMAL----YLSPNLRHLAPLAEWPGLEQAASTLADGLLAGLP 82

Query: 72  IVIVGDYDADGATSTALMILALRDMGADVAYLVPDRFKYGYGLTPAIADLAFTRFTPDLL 131
             + GDYD DG TSTAL+   L   G   A+ +PDR + GYGL  A  +    +    LL
Sbjct: 83  FAVWGDYDVDGVTSTALVKGVLAQHGMAAAHHIPDRREEGYGLNVAWVERLAEQGVR-LL 141

Query: 132 ITVDNGISSHEGVKQAQDHGMQVIITDHHLTTKETPAAEAVVNPNQLGCNFPSKALAGVG 191
           +TVD GIS  E V++A++ GM V+++DHH+  +  P A A+ NP    C  P  ALAGVG
Sbjct: 142 LTVDCGISDVEPVRRARELGMTVVVSDHHMPPEGLPDANAICNPRLAEC--PCPALAGVG 199

Query: 192 VAFYVLANLCSFRKRADQSVSNITQYLDLVALGTYADVASLDYNNRILVDAGLKRIQQQQ 251
           V+F V+A + +         +++  +LDLVALGT ADV +L   NRILV  GL +I + +
Sbjct: 200 VSFLVMAAVNAALAERTGKKADMRDFLDLVALGTLADVVNLHGQNRILVKNGLLKIAEAR 259

Query: 252 CRPGILALLDIAGREP-AALKAQDLGFVLGPRINAAGRMETMEIGIECLLAPDLENAYPL 310
            RPG+ AL  ++G  P AA+ A  + F L PRINAAGRM   E+ ++ LL  D   A  L
Sbjct: 260 -RPGMAALKTVSGYNPTAAIGAGQVVFGLAPRINAAGRMGKAELALQLLLTDDHAEAARL 318

Query: 311 ARQLNQLNIERRQIEAQMKQEALRYLEQLQLSKENIPPALIMFEEHWHQGVIGIVAGRLK 370
           A++L+  N  RR  E ++   A +  E  QL +      L++  + WH GVIGIVA R+ 
Sbjct: 319 AQELDAENARRRAEEDRILDAAKKQAEG-QLDR----MGLVLHGDDWHPGVIGIVASRIV 373

Query: 371 EQFHRPSIVFAADEDGIHIKGSARSVEGIHIRDCIEQIAEQYPHLVRYFGGHAAAAGLTI 430
           ++F+RP+++ ++  DG  +KGS RSV    +   + + A+    L   FGGH  AAG+++
Sbjct: 374 DEFYRPTLILSS--DGQSMKGSGRSVAEFDLHAGLTRCAD----LFTAFGGHHQAAGMSM 427

Query: 431 RKEHFLEFKQVFIQLI-AGMDETLLSATLWTDGELPVEALVLDTVDL--IEKLGPWGQKF 487
              H    ++ F  ++ A + +T L+  L  DGEL   AL  D   L  +E L P+G   
Sbjct: 428 PASHVDTLRERFDAVVRAELGDTPLTPRLKLDGELGF-ALAGDFTLLKELEMLQPFGTGN 486

Query: 488 PSPVFEGIFKVV-DFRWLKET--HLKLRLALNN-GQVVDAIAFNAKDRFEYDPENDQVDL 543
             PVF     +V D R    T  H++L+L   + G  + A A+    +F       +V L
Sbjct: 487 AEPVFASPPVLVRDLRRFGPTRDHVELQLTDESCGITLRAKAWRQSGQFPDSLRGTRVRL 546

Query: 544 VYELERNEFNGNTGLQLRIIHLKQK 568
            Y    + +NG   + LRI   K++
Sbjct: 547 AYTPRIDRYNGAASVDLRIKDWKRE 571