SEED Subsystem: DNA repair, bacterial in Sphingobium sp. HT1-2

Role	Gene	Name
A/G-specific adenine glycosylase (EC 3.2.2.-)	GFF1061
ADA regulatory protein	GFF4566
Alkylated DNA repair protein AlkB	No genes
DNA mismatch repair endonuclease MutH	No genes
DNA polymerase IV (EC 2.7.7.7)	GFF4203
DNA polymerase-like protein MT3142	No genes
DNA polymerase-like protein PA0670	GFF3103
	GFF4855
DNA recombination protein RmuC	GFF747
DNA recombination-dependent growth factor C	No genes
DNA repair exonuclease family protein YhaO	No genes
DNA repair protein RadA	GFF1895
DNA repair protein RadC	GFF3477
	GFF3478
DNA repair protein RecN	GFF2340
DNA-damage-inducible protein I	No genes
DNA-damage-inducible protein J	No genes
Endonuclease IV (EC 3.1.21.2)	No genes
Endonuclease V (EC 3.1.21.7)	No genes
Exodeoxyribonuclease III (EC 3.1.11.2)	GFF2556
	GFF4187
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	GFF1052
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	GFF1051
	GFF2401
Exonuclease SbcC	No genes
Exonuclease SbcD	No genes
G:T/U mismatch-specific uracil/thymine DNA-glycosylase	GFF47
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	No genes
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	GFF3953
	GFF4566
RecA protein	GFF3120
Recombinational DNA repair protein RecT (prophage associated)	No genes
SOS-response repressor and protease LexA (EC 3.4.21.88)	GFF3541
Single-stranded DNA-binding protein	GFF3264
	GFF4260
Very-short-patch mismatch repair endonuclease (G-T specific)	No genes