SEED Subsystem: Branched-Chain Amino Acid Biosynthesis in Dickeya dadantii 3937

Experiments:

Role Gene Name M9+glycerol  
⨯
(R)-citramalate synthase (EC 2.3.1.182) No genes
2-isopropylmalate synthase (EC 2.3.3.13) DDA3937_RS02895 -0.2
  DDA3937_RS18115 -1.7
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) DDA3937_RS18125 -2.2
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) DDA3937_RS18130 -2.6
3-isopropylmalate dehydrogenase (EC 1.1.1.85) DDA3937_RS18120 -2.1
Acetolactate synthase large subunit (EC 2.2.1.6) DDA3937_RS18105 -0.1
  DDA3937_RS18170 -1.6
  DDA3937_RS20170 -0.5
Acetolactate synthase small subunit (EC 2.2.1.6) DDA3937_RS18100 -0.2
  DDA3937_RS18175 -0.3
  DDA3937_RS20165 -0.5
Acetolactate synthase small subunit (EC 2.2.1.6), Xanthomonadales type No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type 2 No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) DDA3937_RS11775 +0.0
  DDA3937_RS20160 -0.9
Dihydroxy-acid dehydratase (EC 4.2.1.9) DDA3937_RS20155 -3.4
Ketol-acid reductoisomerase (EC 1.1.1.86) DDA3937_RS20130 -3.4
Leucine dehydrogenase (EC 1.4.1.9) No genes
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system DDA3937_RS02275 -0.1
  DDA3937_RS09590 -2.3
  DDA3937_RS10640 -0.3
Threonine dehydratase (EC 4.3.1.19) No genes
Threonine dehydratase biosynthetic (EC 4.3.1.19) DDA3937_RS20150 -2.5
Threonine dehydratase, catabolic (EC 4.3.1.19) DDA3937_RS08075 +0.8
Valine--pyruvate aminotransferase (EC 2.6.1.66) DDA3937_RS21090 -0.2

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