SEED Subsystem: Inositol catabolism in Pseudomonas syringae pv. syringae B728a

Experiments:

Role Gene Name Citric Acid (C)  
⨯
5-deoxy-glucuronate isomerase (EC 5.3.1.-) Psyr_3272 -0.0
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) No genes
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29) No genes
5-keto-2-deoxygluconokinase (EC 2.7.1.92) Psyr_3274 -0.0
Epi-inositol hydrolase (EC 3.7.1.-) Psyr_3269 -0.0
Fe-containing alcohol dehydrogenase No genes
Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1) Psyr_3267 -0.1
Inositol oxygenase (EC 1.13.99.1) No genes
Inositol transport system ATP-binding protein Psyr_2571 +0.2
  Psyr_3264 +0.3
Inositol transport system permease protein Psyr_2570 -0.1
  Psyr_3263 +0.3
Inositol transport system sugar-binding protein Psyr_2569 -0.0
  Psyr_3265 -0.1
Inosose dehydratase (EC 4.2.1.44) Psyr_3273 -0.1
Inosose isomerase (EC 5.3.99.-) Psyr_3270 -0.3
Major myo-inositol transporter IolT No genes
Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Psyr_3271 +0.1
Minor myo-inositol transporter IolF No genes
Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Psyr_2455 +0.2
  Psyr_3266 -0.4
  Psyr_3268 +0.2
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) No genes
Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) No genes
Predicted transcriptional regulator of the myo-inositol catabolic operon Psyr_3275 -1.2
Sodium/myo-inositol cotransporter No genes
Transcriptional repressor of the myo-inositol catabolic operon DeoR family No genes
uncharacterized domain Psyr_3274 -0.0

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