SEED Subsystem: Peptidoglycan Biosynthesis in Rhodospirillum rubrum S1H

Experiments:

Role Gene Name acetate; Light intensity 18 uM  
⨯
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) Rru_A0473 N.D.
  Rru_A0956 N.D.
D-alanine--D-alanine ligase (EC 6.3.2.4) Rru_A0947 N.D.
D-alanine--D-alanine ligase A (EC 6.3.2.4) No genes
D-alanine--D-alanine ligase B (EC 6.3.2.4) No genes
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Rru_A0132 +0.2
  Rru_A1704 N.D.
  Rru_A2113 N.D.
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Rru_A3030 N.D.
Glutamate racemase (EC 5.1.1.3) No genes
Glutamine synthetase type I (EC 6.3.1.2) Rru_A2086 N.D.
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-) No genes
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Rru_A1706 -0.4
  Rru_A2632 -0.4
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Rru_A0027 +0.1
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Rru_A0105 +2.0
  Rru_A2147 N.D.
  Rru_A2520 -0.5
  Rru_A3393 +0.5
Murein-DD-endopeptidase (EC 3.4.99.-) No genes
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) Rru_A3030 N.D.
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23) No genes
Penicillin-binding protein 2 (PBP-2) No genes
Penicillin-binding protein 4 precursor No genes
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase No genes
Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C No genes
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Rru_A0953 N.D.
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
Rare lipoprotein A precursor Rru_A1025 +0.2
  Rru_A1705 +0.4
Rod shape-determining protein RodA Rru_A3679 N.D.
UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Rru_A0948 N.D.
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Rru_A2931 N.D.
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Rru_A0950 N.D.
UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Rru_A0949 N.D.
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Rru_A0952 N.D.
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Rru_A0955 N.D.
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Rru_A0954 N.D.

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