SEED Subsystem: One-carbon metabolism by tetrahydropterines in Pseudomonas syringae pv. syringae B728a ΔmexB

Experiments:

Role Gene Name epiphytic; Lima bean  
⨯
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Psyr_0459 +0.4
5-FCL-like protein, but predicted not to be 5-formyltetrahydrofolate cyclo-ligase (5-FCL) No genes
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) Psyr_0317 -0.4
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC 1.5.99.9) No genes
Formate--tetrahydrofolate ligase (EC 6.3.4.3) No genes
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) No genes
Formyltetrahydrofolate deformylase (EC 3.5.1.10) Psyr_2226 -0.2
  Psyr_4018 -2.5
  Psyr_4717 -0.1
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) Psyr_1743 N.D.
  Psyr_2225 -1.5
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9) No genes
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) Psyr_1743 N.D.
  Psyr_2225 -1.5
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) No genes

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