SEED Subsystem: Ammonia assimilation in Pseudomonas syringae pv. syringae B728a ΔmexB

Experiments:

Role Gene Name epiphytic; Lima bean  
⨯
Ammonium transporter Psyr_0189 -0.2
  Psyr_2277 -0.4
Ammonium transporter family No genes
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) No genes
Global nitrogen regulatory protein, CRP family of transcriptional regulators No genes
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Psyr_0262 -0.1
  Psyr_0411 -3.4
  Psyr_0418 -0.2
  Psyr_0616 +0.4
  Psyr_1014 +0.3
  Psyr_2035 -0.0
  Psyr_2058 N.D.
  Psyr_2072 +0.1
  Psyr_2145 N.D.
  Psyr_2276 +0.6
  Psyr_2426 N.D.
  Psyr_2765 +0.4
  Psyr_2911 +0.5
  Psyr_3260 +0.4
  Psyr_3668 N.D.
  Psyr_4015 -0.4
  Psyr_4055 -0.5
  Psyr_4375 +0.4
  Psyr_4465 -0.0
Glutamate synthase [NADPH] putative GlxC chain (EC 1.4.1.13) Psyr_2275 -0.0
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Psyr_0412 -2.6
  Psyr_1280 -0.2
Glutamate synthase, alpha subunit domain protein No genes
Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Psyr_0519 -0.1
Glutamine amidotransferase protein GlxB (EC 2.4.2.-) Psyr_2274 -0.3
Glutamine amidotransferase, class-II Psyr_1576 +0.0
Glutamine synthetase inactivating factor IF17 No genes
Glutamine synthetase inactivating factor IF7 No genes
Glutamine synthetase type I (EC 6.3.1.2) Psyr_2273 -0.1
  Psyr_4817 N.D.
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
Nitrogen regulation protein NR(I) Psyr_3995 +0.9
  Psyr_4822 N.D.
  Psyr_5088 -0.3
Nitrogen regulation protein NR(II) (EC 2.7.3.-) No genes
Nitrogen regulatory protein P-II No genes
Nitrogen regulatory protein P-II, glnK Psyr_0190 N.D.
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
[Protein-PII] uridylyltransferase (EC 2.7.7.59) Psyr_1341 -1.8
ammonium/methylammonium permease No genes

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