SEED Subsystem: Bacterial Chemotaxis in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name Sisomicin 0.008 mg/ml  
⨯
Aerotaxis sensor receptor protein No genes
Chemotaxis protein CheC -- inhibitor of MCP methylation No genes
Chemotaxis protein CheD No genes
Chemotaxis protein CheV (EC 2.7.3.-) AO353_02870 +0.3
  AO353_15430 +0.1
  AO353_19285 -0.2
Chemotaxis protein CheX No genes
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) AO353_02865 -0.2
  AO353_04235 +0.0
  AO353_23920 +0.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY AO353_02910 +0.1
  AO353_18790 -0.4
  AO353_23925 +0.0
Chemotaxis response - phosphatase CheZ AO353_18795 +0.1
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) AO353_04220 -0.2
  AO353_18805 -0.3
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) AO353_05370 -0.3
  AO353_05375 -0.1
  AO353_05380 -0.2
  AO353_05390 -0.2
  AO353_09215 -0.1
  AO353_25855 +0.2
Flagellar motor switch protein FliG AO353_18685 +0.0
Flagellar motor switch protein FliM AO353_18730 +0.0
Flagellar motor switch protein FliN AO353_18735 N.D.
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) No genes
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE AO353_25115 -0.0
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) AO353_01650 +0.2
  AO353_03160 +0.3
  AO353_04245 +0.1
  AO353_05500 +0.1
  AO353_05850 +2.0
  AO353_06200 +0.5
  AO353_12335 -0.5
  AO353_12785 -0.4
  AO353_13695 -0.2
  AO353_19795 +0.2
  AO353_25265 -0.0
  AO353_25765 -0.1
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) AO353_23795 -0.0
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein) No genes
Positive regulator of CheA protein activity (CheW) AO353_18830 -0.4
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) No genes
Signal transduction histidine kinase CheA (EC 2.7.3.-) AO353_08085 -1.6
  AO353_18800 +0.2

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