SEED Subsystem: D-gluconate and ketogluconates metabolism in Agrobacterium fabrum C58

Experiments:

Role Gene Name D-Glucuronic gamma lactone (C)  
2,5-diketo-D-gluconate reductase A (EC 1.1.1.274) No genes
2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274) No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, cytochrome c No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, flavoprotein No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, gamma subunit No genes
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) Atu2296 -0.3
2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) No genes
5-keto-D-gluconate 5-reductase (EC 1.1.1.69) Atu1407 -0.2
  Atu4086 +0.1
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA No genes
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldB No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit No genes
Gluconate operon transcriptional repressor No genes
Gluconate permease No genes
Gluconate permease, Bsu4004 homolog No genes
Gluconate transporter family protein No genes
Gluconate utilization system Gnt-I transcriptional repressor No genes
Gluconokinase (EC 2.7.1.12) Atu0195 -0.0
  Atu3964 -4.0
Glucose 1-dehydrogenase (EC 1.1.1.47) No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, cytochrome c No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, flavoprotein No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, gamma subunit No genes
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) Atu4135 +0.1
High-affinity gluconate transporter GntT No genes
Hypothetical oxidoreductase YqhD (EC 1.1.-.-) No genes
Hypothetical transcriptional regulator YqhC No genes
L-idonate 5-dehydrogenase (EC 1.1.1.264) Atu1408 +0.0
  Atu3256 -0.0
  Atu4087 -0.1
L-idonate, D-gluconate, 5-keto-D-gluconate transporter No genes
Low-affinity gluconate/H+ symporter GntU No genes
Positive regulator of L-idonate catabolism No genes
Predicted gluconate TRAP family transporter, DctM subunit Atu4827 -0.0
Predicted gluconate TRAP family transporter, DctP subunit No genes
Predicted gluconate TRAP family transporter, DctQ subunit No genes

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